Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F11
(523 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 113 9e-26
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 112 2e-25
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 111 4e-25
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 100 1e-21
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 91 3e-19
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 82 2e-16
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 41 4e-04
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 34 0.050
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 33 0.12
At4g21430.1 68417.m03097 transcription factor jumonji (jmjC) dom... 28 4.4
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 27 5.8
At1g34130.1 68414.m04234 oligosaccharyl transferase STT3 subunit... 27 5.8
At3g52180.1 68416.m05729 protein tyrosine phosphatase/kinase int... 27 7.7
At3g13070.1 68416.m01634 CBS domain-containing protein / transpo... 27 7.7
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 113 bits (271), Expect = 9e-26
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 68 MAPIKVGDMLP--SLDLF-EDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 238
MAPI VGD++P ++ F E+ V+ I AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 239 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLAD 367
A+++KS+G+ EI+C SVNDP+VM AWG + V+ +AD
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVAD 103
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 112 bits (269), Expect = 2e-25
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 68 MAPIKVGDMLP--SLDLF-EDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 238
MAPI VGD++P ++ F E+ V+ I AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 239 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLAD 367
A+++KS+G+ EI+C SVNDP+VM AWG + V+ +AD
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVAD 103
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 111 bits (266), Expect = 4e-25
Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Frame = +2
Query: 68 MAPIKVGDMLP--SLDLF-EDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 238
MAPI VGD++P ++ F E+ + + AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 239 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLAD 367
+ A+++KS+GV EI+C SVNDP+VM AWG + V+ +AD
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVAD 103
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 99.5 bits (237), Expect = 1e-21
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +2
Query: 41 RALHTSKIAMAPIKVGDMLPSLDLFEDSPAN----KVNTCEITAGKKVVLFAVPGAFTPG 208
R+ T+ + A I VGD LP L P+ V +TAGKK +LFAVPGAFTP
Sbjct: 62 RSFATTPVT-ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPT 120
Query: 209 CSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPN 373
CS+ H+PG+V A +++S+G+ I C+SVND +VM AW +V +L+D N
Sbjct: 121 CSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGN 175
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 91.5 bits (217), Expect = 3e-19
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = +2
Query: 68 MAPIKVGDMLP--SLDLFEDSPA-NKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 238
MAPI VGD +P S+ F+D V+ + AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 239 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTK 343
+ A+++KS GV EI+C+S +DP+++ A + K
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKHVK 95
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 82.2 bits (194), Expect = 2e-16
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 149 EITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGA 328
+I GKKVV+F +PGA+T CS+ H+P Y + DK K++G+ ++CVSVNDP+ + W
Sbjct: 69 DIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAE 128
Query: 329 QHNTKGKVRMLADPNWRIHQS 391
+ K + D + + H+S
Sbjct: 129 KLGAKDAIEFYGDFDGKFHKS 149
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 41.1 bits (92), Expect = 4e-04
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = +2
Query: 68 MAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 247
M I +GD +P+L++ ++ +K + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 248 DKMKSEGVSEIVCVSVNDPYVMAAW-----GAQHNTKGKVRMLADPNWRI 382
+ GV +++ +S +D W H +K ++ADPN I
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEI 106
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 34.3 bits (75), Expect = 0.050
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +2
Query: 14 STFNNGVYVRALHTSKIA---MAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFA 184
ST + Y+ + +S + A + G P L + + K + + GK VVL+
Sbjct: 45 STLTHSSYISPVSSSSLKGLIFAKVNKGQAAPDFTLKDQN--GKPVSLKKYKGKPVVLYF 102
Query: 185 VPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQH 334
P TPGC+K + + +K K G +E++ +S +D A+ +++
Sbjct: 103 YPADETPGCTK-QACAFRDSYEKFKKAG-AEVIGISGDDSASHKAFASKY 150
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = -2
Query: 375 QFGSASIRTFPLVLCWAPQAAITYGSFTDTHTISETPSLFILSAFCTYPGK*VLEHPGVN 196
Q G+ ++ + P C A + GS +D S+ S +L++ C++ G +L GVN
Sbjct: 10 QSGTCNVCSAPCSSCMHHNAEFS-GSKSDES--SDENSHGVLASQCSFNGDNLLRSSGVN 66
Query: 195 APGTANKTT 169
APG+++ T+
Sbjct: 67 APGSSHNTS 75
>At4g21430.1 68417.m03097 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 728
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 292 CERSVCYGRLGCPAQHQGKGTNAC*SKLAHSSKLLTSER 408
C+R G+ C + H + K+A SSKL+ S R
Sbjct: 23 CKRRALEGKKMCESHHSQQSLKRSKQKVAESSKLVRSRR 61
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 462 DSKVEDWTVEPDGTGWSCSL 521
D +E W V P GW C L
Sbjct: 34 DGSLEIWLVSPGAVGWHCQL 53
>At1g34130.1 68414.m04234 oligosaccharyl transferase STT3 subunit,
putative similar to SP|P39007 Oligosaccharyl transferase
STT3 subunit {Saccharomyces cerevisiae}; contains Pfam
profile PF02516: Oligosaccharyl transferase STT3 subunit
Length = 735
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -1
Query: 370 WISKHSYLSLGVVLGTPSGHNIRIV---HRHAYYF 275
W++ +Y S +VL H RI+ +R AYY+
Sbjct: 514 WVTAEAYSSPSIVLAARGAHGNRIIFDDYREAYYW 548
>At3g52180.1 68416.m05729 protein tyrosine phosphatase/kinase
interaction sequence protein (PTPKIS1) identical to
PTPKIS1 protein [Arabidopsis thaliana] GI:11595504;
contains Pfam profile PF00782: Dual specificity
phosphatase, catalytic domain
Length = 379
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 370 KLAHSSKLLTSERTCHRWVDSVRNVS 447
KL + KLL S+R+C +D++RN +
Sbjct: 220 KLMEAHKLLMSKRSCFPKLDAIRNAT 245
>At3g13070.1 68416.m01634 CBS domain-containing protein /
transporter associated domain-containing protein similar
to SP|Q54318 Hemolysin C [Serpulina hyodysenteriae]
{Treponema hyodysenteriae}; contains Pfam profiles
PF00571: CBS domain, PF03471: Transporter associated
domain, PF01595: Domain of unknown function
Length = 661
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 490 STVQSSTLLSMITSEKRFERNPPNGGRFVPRSRALMNAPIWISKHSYLS 344
S + S + S + KR+ + GRF+PR+ + SKHS LS
Sbjct: 9 SVLGRSVIDSKTLNLKRYGQKSKLSGRFLPRAELHCPVALSSSKHSNLS 57
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,291,455
Number of Sequences: 28952
Number of extensions: 263310
Number of successful extensions: 766
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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