Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F07
(300 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.70
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.92
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_51402| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.9e-12) 27 2.1
SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55) 27 2.8
SB_25490| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_49394| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.2) 27 3.7
SB_19631| Best HMM Match : zf-CCHC (HMM E-Value=0.0088) 27 3.7
SB_8893| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_6251| Best HMM Match : NMU (HMM E-Value=5.7) 26 4.9
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 26 6.5
SB_25378| Best HMM Match : CNH (HMM E-Value=0.037) 26 6.5
SB_4412| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.5
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 26 6.5
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_8291| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_46923| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_33962| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_28162| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 30.7 bits (66), Expect = 0.23
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 128 LFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNALYLDQAEMPKKKS 295
L ++ L S E+ D V+ RV+SE+ + + DLD +++YL + ++K+
Sbjct: 505 LSQHTLELSSEEDHDMDDVRNSRVLSEEARNILSDLDLDNNHSVYLGGLLVTEEKA 560
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.1 bits (62), Expect = 0.70
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 86 VFWKNMKRVMNSFVLFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNALYL 265
V W RV + K L SF+R+E DFP + +E E +VT + L TN L
Sbjct: 817 VEWSCDNRVQLNADKCKELRISFARQERDFPPISIEGKEIE-VVTSVKLVRLTLTNNLTW 875
Query: 266 DQ--AEMPKKKS 295
+ E+ KK S
Sbjct: 876 NDHVTEVTKKAS 887
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 28.7 bits (61), Expect = 0.92
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 153 KLGSRFLKSTKEFITRFIFFQNTGSRKQVVYISRAVGT 40
+L S+F +FITR + F + R Q++ + A GT
Sbjct: 348 ELESKFTGGDNDFITRILLFNDLYDRSQILGLQLANGT 385
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 213 IFSDTTRSTWTPGKSSSSREKLGSRFLKSTKEF 115
+++ +T +T TPG SSS + + S ++ ST +
Sbjct: 878 LYTPSTPTTTTPGLSSSGDKMISSHYVTSTASY 910
>SB_51402| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.9e-12)
Length = 1206
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 196 AFNLDTREIKFLARKTRQQVFEKHER 119
AF + RE+ +L +TR+Q++EK R
Sbjct: 1061 AFRDEVRELDWLDHETREQIYEKVHR 1086
>SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55)
Length = 1087
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 253 IRXIQVKFIHKGDHLFRYNAFNLDTREIKFLARKTRQQ 140
+R I + G+ L + +L TRE++FL++K Q
Sbjct: 837 LRGILTELAFHGEDLIYFRGGSLATRELRFLSKKRTAQ 874
>SB_25490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.1 bits (57), Expect = 2.8
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 86 VFWKNMKRVMNSFVLFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNALYL 265
V W RV + K L SF+R+E DF + +E K+VT + L TN L
Sbjct: 32 VEWSCDNRVQLNADKCKELRISFARQEKDFTPISIEG-KEIKVVTSVKLLGLTLTNNLTW 90
Query: 266 DQ--AEMPKKKS 295
+ E+ KK S
Sbjct: 91 NDHVTEVTKKAS 102
>SB_49394| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.2)
Length = 373
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 28 QVHVRSHCSRYVHYLLTRSSILEEYETRYELFR 126
Q H +C+ VH LL + S L +T Y R
Sbjct: 115 QTHYTRYCANTVHSLLRKHSTLATAQTHYTYTR 147
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 28 QVHVRSHCSRYVHYLLTRSSILEEYETRYELFRA 129
Q H +C+ VH LL + + L +T Y + A
Sbjct: 167 QTHYTRYCANTVHSLLRKHTTLATAQTHYTRYCA 200
>SB_19631| Best HMM Match : zf-CCHC (HMM E-Value=0.0088)
Length = 329
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 11 NQYNMDKYTYVPTALDMYTTCLRDPVF 91
NQ NM ++ VPT ++ TCL +F
Sbjct: 290 NQCNMSEHYRVPTRSEITKTCLEPNIF 316
>SB_8893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +2
Query: 89 FWKNMKRVMNSFVLFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNALYLD 268
FWK + + FK+ L S G + V S+K + D + D N L L+
Sbjct: 84 FWKKQEEGIEFVKHFKSHLGSIQGISASADGQLLCSVASDKSMKVFDVINFDMINMLKLN 143
Query: 269 QA 274
A
Sbjct: 144 HA 145
>SB_6251| Best HMM Match : NMU (HMM E-Value=5.7)
Length = 186
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 VFWKNMKRVMNSFVLFKNLLPS-FSREELDFPGVQVERVVSEKMVTFMDE 232
+FWKN+ V+ + L K S FSR++ ++ +R + + + DE
Sbjct: 135 LFWKNLYEVLEKYDLEKWWKESWFSRQKQEYGNRTYKRCWEDSLYYYRDE 184
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 25.8 bits (54), Expect = 6.5
Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Frame = +2
Query: 5 SYNQYNMDKYTYVPTALDMYTTCLRDPVF-WKNMKRVMNSFVLFK---NLLPSFSREELD 172
+Y + +K + T C F +++K +N ++ + N P
Sbjct: 5 NYRGSSEEKQAIQNACIAHVTNCTAKCTFAHRSLKFTLNRSMIARLSDNRAPRLGTNNSS 64
Query: 173 FPGVQVERVVSEKMVTFMDEFDLDXTNAL-YLDQAEMPKK 289
+PG++ ++ KMV +F D AL L Q P +
Sbjct: 65 YPGIRASWEINNKMVDSPSDFHHDWRRALDSLHQGHAPSR 104
>SB_25378| Best HMM Match : CNH (HMM E-Value=0.037)
Length = 346
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 128 LFKNLLPSFSREELDFPGVQVERVVSE 208
LF++LLPS R++L++P + ++SE
Sbjct: 306 LFEDLLPSDFRKQLEYPDEPPKLLMSE 332
>SB_4412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/32 (31%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 6 VTISIIW--TSTRTFPLLSICTLLAYEIQYSG 95
++ +IW ++ R F ++ + TL+AY ++Y+G
Sbjct: 247 ISRKVIWLVSTGRNFIVVLMATLVAYAVEYTG 278
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 70 LLTRSSILEEYETRYELFRAFQKPAA 147
LLT +S+ E R LF AF PA+
Sbjct: 112 LLTNTSVFSETRFRCRLFSAFAAPAS 137
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 119 SFVLFKNLLPSFSREELDFPGVQVERVVSEKM 214
S+ LF N+ P E FP +QV+R+VS+++
Sbjct: 50 SYFLFCNVWPMDC--EPQFPTIQVDRLVSQRI 79
>SB_8291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 25.4 bits (53), Expect = 8.6
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 86 VFWKNMKRVMNSFVLFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNAL 259
V W RV + K L SF+R+E DF + VE E +VT + L TN L
Sbjct: 40 VEWSCDNRVQLNADKCKELRISFARQERDFTPIGVEGKEIE-VVTSVKLLGLTLTNNL 96
>SB_46923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 25.4 bits (53), Expect = 8.6
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 86 VFWKNMKRVMNSFVLFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNAL 259
V W RV + K L SF+R+E DF + VE E +VT + L TN L
Sbjct: 91 VEWSCDNRVQLNADKCKELRISFARQERDFTPIGVEGKEIE-VVTSVKLLGLTLTNNL 147
>SB_33962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 185 QVERVVSEKMVTFMDEFDLDXTNALYLDQAEMPK 286
++ER++ +KMVT D D D +++++ E PK
Sbjct: 616 RIERILEKKMVTETDTDDADAYISVFVEN-EGPK 648
>SB_28162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 86 VFWKNMKRVMNSFVLFKNLLPSFSREELDFPGVQVERVVSEKMVTFMDEFDLDXTNAL 259
V W RV K L SF+R+E DF + +E E +VT + L TN L
Sbjct: 150 VEWSCDNRVQLKADKCKELRISFARQERDFTPISIEGKEIE-VVTSVKLLGLTLTNNL 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,247,722
Number of Sequences: 59808
Number of extensions: 169480
Number of successful extensions: 493
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 352102492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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