Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F06
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.1  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.8  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.8  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   6.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.8  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.0  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 497 CNGDTKTPKCQKNCES 544
           C+GD    KC+  C S
Sbjct: 60  CSGDISVTKCEGFCNS 75


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 497 CNGDTKTPKCQKNCES 544
           C+GD    KC+  C S
Sbjct: 60  CSGDISVTKCEGFCNS 75


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 393 STLGLYRVAIITQAKVADLTKFHRVNITYLETECPVTVILKH-QNAKRTVN 542
           ++  L++   + +A VA L  F   N+T ++        +KH +N  R  N
Sbjct: 331 TSTSLWKDKAMIEANVAVLHSFQMKNVTIVDHHTASESFMKHYENEMRLRN 381


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 437 LGLSYNCHPIQAQRASNIPKLKLAYHHYNRDR 342
           LG  +NC       +  +  L L +HH   DR
Sbjct: 257 LGSYFNCIMFMVASSVVLTVLVLIFHHRTPDR 288


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 437 LGLSYNCHPIQAQRASNIPKLKLAYHHYNRDR 342
           LG  +NC       +  +  L L +HH   DR
Sbjct: 257 LGSYFNCIMFMVASSVVLTVLVLIFHHRTPDR 288


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 437 LGLSYNCHPIQAQRASNIPKLKLAYHHYNRDR 342
           LG  +NC       +  +  L L +HH   DR
Sbjct: 257 LGSYFNCIMFMVASSVVLTVLVLIFHHRTPDR 288


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 272 CIYSNATKHFHFSAEDLVSCC 334
           CIY+  +K F F+ + ++  C
Sbjct: 60  CIYALFSKDFRFAFKSIICKC 80


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 272 CIYSNATKHFHFSAEDLVSCC 334
           CIY+  +K F F+ + ++  C
Sbjct: 508 CIYALFSKDFRFAFKSIICKC 528


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 437 LGLSYNCHPIQAQRASNIPKLKLAYHHYNRDR 342
           LG  +NC       +  +  L L +HH   DR
Sbjct: 325 LGSYFNCIMFMVASSVVLTVLVLNFHHRTPDR 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,193
Number of Sequences: 438
Number of extensions: 3967
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)