Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F05
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   107   6e-26
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  107 bits (257), Expect = 6e-26
 Identities = 58/178 (32%), Positives = 87/178 (48%)
 Frame = +3

Query: 3   KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
           KLG+ ED  NR++L++LLR+                D    L +YV+R+KPNQ HIYYI 
Sbjct: 435 KLGIHEDSQNRAKLSELLRYHTSASG----------DEACSLKDYVSRIKPNQKHIYYIT 484

Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
           G S+ +V  S F ER+ +RG+EV+Y+TE +DEY +  + E+DG    ++ +E  +L E  
Sbjct: 485 GESKEQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQMKEFDGKTLVSVTKEGLELPEDE 544

Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
                          L + +   L   V +                  +GWT NMER+
Sbjct: 545 EEKKKREEDKAKFEGLCKVMKSILDNKVEKVVVSNRLVESPCCITMRRYGWTANMERI 602


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 278 LVDGLGEVEHLVPATHEP 225
           ++ G G++E ++P  H P
Sbjct: 114 MLTGFGKIEQVLPPHHAP 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,892
Number of Sequences: 336
Number of extensions: 685
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)