Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F05
         (546 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom...    97   2e-21
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr...    25   5.5  
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito...    25   9.6  

>SPAC926.04c |hsp90|swo1|heat shock protein
           Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 704

 Score = 96.7 bits (230), Expect = 2e-21
 Identities = 52/178 (29%), Positives = 86/178 (48%)
 Frame = +3

Query: 3   KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
           KLG+ ED +NR  LAKLLR+               PD ++ L +Y+ +M  +Q +IY+I 
Sbjct: 421 KLGIHEDAANRPALAKLLRYNSLNS----------PDDLISLEDYITKMPEHQKNIYFIT 470

Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
           G S+  V+ SPF E    + ++VL++ + +DEY ++ L E++G K  NI ++  +L+E+ 
Sbjct: 471 GESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETD 530

Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
                            + L   LG  V +                  +GW+ NMER+
Sbjct: 531 EEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANMERI 588


>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 808

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 120 VFLSEYVARMKPNQHHIYYIAGSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLP 299
           V L  ++     + H +    G +  E ++    E  + R  E  +  E V  YC SS+ 
Sbjct: 595 VDLLSWMTSFTRSLHFVAEFLGETE-EAEKLAGYENAMLRNLEDNHWDEEVQAYCDSSVD 653

Query: 300 EYD 308
           EYD
Sbjct: 654 EYD 656


>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
           pyrophosphate synthase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 920

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +3

Query: 189 SRAEVQRSPFAERLVRR---GYEVLYLTEAVDE 278
           S AE ++SP  + +VRR   G E+ ++T   +E
Sbjct: 269 SHAETRKSPVVDGIVRRNPHGKEIRFITNLSEE 301


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,069,571
Number of Sequences: 5004
Number of extensions: 11786
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)