Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F05
(546 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 112 2e-25
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 112 2e-25
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 112 2e-25
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 112 2e-25
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 110 8e-25
04_01_0042 + 473912-474058,474208-474349,474442-476264 109 1e-24
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 99 3e-21
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 92 2e-19
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 90 9e-19
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 45 5e-05
03_01_0400 - 3102325-3102519,3103009-3103455,3105063-3105500 27 9.8
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 112 bits (270), Expect = 2e-25
Identities = 61/178 (34%), Positives = 90/178 (50%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG+ ED +NR+++A+LLR+ D + L +YV RMK Q+ IYYI
Sbjct: 419 KLGIHEDSTNRNKIAELLRYHSTKSG----------DELTSLKDYVTRMKEGQNDIYYIT 468
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
G S+ V+ SPF E+L ++GYEVLY+ +A+DEY + L E++G K + +E LDES
Sbjct: 469 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 528
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
L + + + LG V + +GWT NMER+
Sbjct: 529 DEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERI 586
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 112 bits (269), Expect = 2e-25
Identities = 61/178 (34%), Positives = 89/178 (50%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG+ ED +NR+++A+LLR+ D + L +YV RMK Q IYYI
Sbjct: 165 KLGIHEDSTNRTKIAELLRYHSTKSG----------DELTSLKDYVTRMKEGQSEIYYIT 214
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
G S+ V+ SPF E+L ++GYEVLY+ +A+DEY + L E++G K + +E LDES
Sbjct: 215 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 274
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
L + + + LG V + +GWT NMER+
Sbjct: 275 DEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERI 332
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 112 bits (269), Expect = 2e-25
Identities = 61/178 (34%), Positives = 89/178 (50%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG+ ED +NR+++A+LLR+ D + L +YV RMK Q IYYI
Sbjct: 419 KLGIHEDSTNRTKIAELLRYHSTKSG----------DELTSLKDYVTRMKEGQSEIYYIT 468
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
G S+ V+ SPF E+L ++GYEVLY+ +A+DEY + L E++G K + +E LDES
Sbjct: 469 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 528
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
L + + + LG V + +GWT NMER+
Sbjct: 529 DEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERI 586
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 112 bits (269), Expect = 2e-25
Identities = 61/178 (34%), Positives = 89/178 (50%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG+ ED +NR+++A+LLR+ D + L +YV RMK Q IYYI
Sbjct: 419 KLGIHEDSTNRTKIAELLRYHSTKSG----------DELTSLKDYVTRMKEGQSEIYYIT 468
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
G S+ V+ SPF E+L ++GYEVLY+ +A+DEY + L E++G K + +E LDES
Sbjct: 469 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 528
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
L + + + LG V + +GWT NMER+
Sbjct: 529 DEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERI 586
>06_03_1404 - 29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 110 bits (264), Expect = 8e-25
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG++ED +NR+RLAKLLRF ++ L EY++RMKP Q I+YI
Sbjct: 550 KLGIIEDATNRNRLAKLLRFESTKSEG----------KLASLDEYISRMKPGQKDIFYIT 599
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
GSS+ ++++SPF ERL ++ YEV+Y T+ VDEY + L +Y+ KFQN+++E L +
Sbjct: 600 GSSKEQLEKSPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKD- 658
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGA-WVTRCXXXXXXXXXXXXXXXXXFGWTGNMERLA 539
LT W L V +GW+ NME++
Sbjct: 659 ---SKLKDLKESFKELTDWWKKALDTESVDSVKISNRLSDTPCVVVTSKYGWSANMEKIM 715
Query: 540 LS 545
S
Sbjct: 716 QS 717
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 109 bits (262), Expect = 1e-24
Identities = 62/178 (34%), Positives = 86/178 (48%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG+ ED NR +LA LLR+ + + L +YV RMK Q +YYI
Sbjct: 424 KLGIHEDSQNRGKLADLLRYHSTKSG----------NELTSLKDYVTRMKEGQKEVYYIT 473
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
G SR V+ SPF E+L ++GYEVL++ +A+DEY + L EYDG K + +E LD+
Sbjct: 474 GESRKAVENSPFLEKLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDD- 532
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
PL + + D LG V + +GWT NMER+
Sbjct: 533 ---DDAKERKRSFEPLCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERI 587
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 98.7 bits (235), Expect = 3e-21
Identities = 59/178 (33%), Positives = 81/178 (45%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG MED N R+A LLRF + ++ L EYV MKP Q IYYIA
Sbjct: 766 KLGCMEDKENHKRIAPLLRFFSSQSN----------EELISLDEYVENMKPEQKDIYYIA 815
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
S + + +PF E+L + YEVL+L + +DE +++L Y +F +I++E DLD
Sbjct: 816 ADSLSSAKHAPFLEKLNEKEYEVLFLVDPMDEVSVTNLNSYKDKRFVDISKE--DLDLGD 873
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
W+ +LG V R FGW+ NMERL
Sbjct: 874 KNEEKEKEIKQEYSQTCDWIKKRLGEKVARVDISNRLSSSPCVLVAAKFGWSANMERL 931
>09_04_0497 - 18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 92.3 bits (219), Expect = 2e-19
Identities = 59/178 (33%), Positives = 79/178 (44%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG +ED N RLA LLRF ++ L +YV M NQ IYYIA
Sbjct: 506 KLGCIEDTGNHKRLAPLLRFYSSKNETD----------LISLDQYVENMPENQKAIYYIA 555
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
S + +PF E+LV++ EVLYL E +DE + +L Y KF +I++E DL+
Sbjct: 556 TDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDISKE--DLELGD 613
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
L W+ +LG V + FGW+ NMERL
Sbjct: 614 EDEDKENESKQEYTLLCDWIKQQLGDKVAKVQISNRLSSSPCVLVSGKFGWSANMERL 671
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 90.2 bits (214), Expect = 9e-19
Identities = 58/178 (32%), Positives = 79/178 (44%)
Frame = +3
Query: 3 KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
KLG +ED N RLA LLRF ++ L +YV M NQ IYYIA
Sbjct: 756 KLGCIEDTGNHKRLAPLLRFHTSKNEGD----------LISLDQYVENMPENQKAIYYIA 805
Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
S + +PF E+LV++ EVLYL E +DE + +L Y KF +I++E +L +
Sbjct: 806 TDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDISKEDLELGDED 865
Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
L W+ +LG V + FGW+ NMERL
Sbjct: 866 EDNKESKQEYTL---LCDWVKQQLGDKVAKVQISKRLSLSPCVLVSGKFGWSANMERL 920
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +3
Query: 189 SRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDE 356
S+ V+ SPF E+L + YEVLY+ +A+DEY + E++G K + A + LDE
Sbjct: 685 SKKAVENSPFLEKL--KDYEVLYMVDAIDEYAVGQFMEFEGKKLIS-ATKGLKLDE 737
>03_01_0400 - 3102325-3102519,3103009-3103455,3105063-3105500
Length = 359
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 YVARMKPNQHHIYYIAGSSRAEV-QRSPFAERLVRRGYEVLYLTEAVDEY 281
Y A + + IY A S + Q S R+VR GYE +YL + Y
Sbjct: 271 YAAPPEERKKRIYSTAPSKFTTIDQNSGLGFRVVRMGYEDMYLCSPGEMY 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,987,999
Number of Sequences: 37544
Number of extensions: 90496
Number of successful extensions: 346
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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