Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F05
         (546 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   151   2e-37
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   105   2e-23
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    43   2e-04
Z81050-14|CAB02851.2|  169|Caenorhabditis elegans Hypothetical p...    27   8.8  
U50307-5|AAK71366.1|  297|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  151 bits (367), Expect = 2e-37
 Identities = 80/182 (43%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
 Frame = +3

Query: 3   KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
           KLGVMEDPSNR RLAKLLRF                D+   L+ YV RMK  Q  IYY+A
Sbjct: 470 KLGVMEDPSNRMRLAKLLRFQSSNDA----------DKTTTLAAYVERMKEKQDAIYYMA 519

Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
           G+SR EV+ SPF ERL+ +GYEVL+LTEAVDEYC+ ++PEY+  KFQN+A+E   +D+  
Sbjct: 520 GTSRKEVETSPFVERLIAKGYEVLFLTEAVDEYCIQAMPEYESKKFQNVAKEGVTIDDGE 579

Query: 363 XXXXXXXXXXXXXXPLTRWLGD-KLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERLA 539
                         PLT WL +  L   + +                  +GW+GNMER+ 
Sbjct: 580 KAKEAHKGLEEEFKPLTDWLKETALKDLIEKAVVSQRLVKSPSALVASSYGWSGNMERIM 639

Query: 540 LS 545
            S
Sbjct: 640 KS 641


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  105 bits (252), Expect = 2e-23
 Identities = 60/178 (33%), Positives = 84/178 (47%)
 Frame = +3

Query: 3   KLGVMEDPSNRSRLAKLLRFXXXXXXXXXXXXXXXPDRMVFLSEYVARMKPNQHHIYYIA 182
           KLG+ ED +NR +L+  LR+                D    L EYV+RMK NQ  IYYI 
Sbjct: 417 KLGIHEDSTNRKKLSDFLRYSTSAG-----------DEPTSLKEYVSRMKENQTQIYYIT 465

Query: 183 GSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEIFDLDESX 362
           G S+  V  S F ER+  RG+EVLY+ + +DEYC+  L EYDG K  ++ +E  +L E+ 
Sbjct: 466 GESKDVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETE 525

Query: 363 XXXXXXXXXXXXXXPLTRWLGDKLGAWVTRCXXXXXXXXXXXXXXXXXFGWTGNMERL 536
                          L + + D L   V +                  +GW+ NMER+
Sbjct: 526 EEKKKFEEDKVAYENLCKVIKDILEKKVEKVGVSNRLVSSPCCIVTSEYGWSANMERI 583


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = +3

Query: 126 LSEYVARMKPNQHHIYYIAGSSRAEVQRSPFAERLVRRGYEVLYLTEAVDEYCLSSLPEY 305
           L +YV RM+  Q  IYY+  ++R   + SP+ E +  +  EVL+L +  DE     L ++
Sbjct: 446 LGDYVKRMQEGQKEIYYMYANNRQLAESSPYYEVIKSQNKEVLFLYDPADEVVFLGLGQF 505


>Z81050-14|CAB02851.2|  169|Caenorhabditis elegans Hypothetical
           protein C50B6.1 protein.
          Length = 169

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 156 NQHHIYYIAGSSRAEVQRSPFAERLVRRGYEVLYLTEA 269
           ++HH+    G    E   +P   +L+RRG+  LYL EA
Sbjct: 2   SRHHVTK-EGEKNGETLFTPEQLQLLRRGFAPLYLQEA 38


>U50307-5|AAK71366.1|  297|Caenorhabditis elegans Hypothetical
           protein F43H9.4 protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 216 FAERLVRRGYEVLYLTEAVDEYCLSSLPEYDGHKFQNIAEEI 341
           F    VR+G E++    +     L+ L  +DGH+ +N+ E++
Sbjct: 193 FPSLCVRKGDELVGFISSETHGALAHLHVFDGHRGKNLGEKL 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,070,057
Number of Sequences: 27780
Number of extensions: 65153
Number of successful extensions: 151
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)