Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F04
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0180 + 1456182-1456359,1456444-1456520,1456570-1456692,145... 31 0.61
03_05_0489 - 24858483-24858637,24858811-24858921,24859013-248594... 29 1.9
05_01_0235 - 1768049-1769634,1770695-1770815,1770965-1771033,177... 29 2.5
01_05_0305 + 20659199-20660026,20660147-20660179 29 2.5
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 3.3
07_03_1124 + 24157441-24157483,24157989-24158020,24158135-241583... 28 3.3
01_03_0285 - 14604499-14604608,14604692-14605203,14605339-146054... 28 3.3
09_06_0302 - 22144271-22144543,22144946-22145083,22146004-221462... 28 4.3
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 4.3
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 27 5.7
11_06_0757 + 26964983-26965048,26965470-26965874,26966921-269678... 27 7.5
10_02_0094 - 5228472-5228703,5229040-5229133,5230627-5230675,523... 27 7.5
07_01_0880 + 7301042-7301548 27 7.5
02_04_0398 - 22598895-22599100,22599865-22599943 27 7.5
02_01_0278 - 1851338-1851412,1851579-1851819,1851946-1852047,185... 27 7.5
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 27 10.0
09_04_0679 - 19398696-19399303,19400425-19400596 27 10.0
09_04_0582 - 18694158-18694256,18694522-18694560,18695564-186957... 27 10.0
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 27 10.0
06_01_0042 + 410061-410544,411401-411837 27 10.0
05_04_0286 + 19833114-19834053,19834149-19834165 27 10.0
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 27 10.0
>03_01_0180 +
1456182-1456359,1456444-1456520,1456570-1456692,
1456783-1456896,1457580-1457666,1458040-1458179,
1458253-1458340,1459125-1459198,1461147-1461340,
1461430-1461632,1461955-1462001,1462084-1462336,
1462551-1462568
Length = 531
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 RGLRQHCTASPLRQAHRASSVLR-PNGDGGRMPMPEPLALSPXNSSXNTLP 152
+GLR+ SPL H S+LR P + + P P +SP S + P
Sbjct: 467 QGLRRTPMTSPLSSYHHGGSILRSPASNNPQSPGTLPTIISPERSPASQAP 517
>03_05_0489 -
24858483-24858637,24858811-24858921,24859013-24859421,
24859746-24859800,24860042-24860318,24860442-24860562,
24860831-24861438,24861552-24861741
Length = 641
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 27 ASPLRQAHRASSVLRPNGDGGRMPMP 104
A+P RQ+ R+++ +R G G R+P P
Sbjct: 96 AAPGRQSQRSNTAVRAGGSGQRLPRP 121
>05_01_0235 -
1768049-1769634,1770695-1770815,1770965-1771033,
1771199-1771323,1771613-1771712,1771806-1771910,
1772559-1772657,1772751-1772867
Length = 773
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 3 RGLRQHCTASPLRQAHRASSVLRPNGDGGR 92
RGLR+ T S LR + ++ P+G+GGR
Sbjct: 22 RGLRRRPTTSLLRCSSPSADAASPSGEGGR 51
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -1
Query: 324 IPVSSPSQMRRTAPGALVVTSGRFTSGRVSHSC--GDIPPHPFTHCNSVATSLLPDEALM 151
+P+ P +++ A A S + V H G+ PP P T S A+ A+
Sbjct: 120 VPLKLPPRLQAAAAAAAAADSS-LSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVG 178
Query: 150 VEYWXKS 130
V W K+
Sbjct: 179 VSLWRKA 185
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 85 GGECRCLNHWLSPXPTLRPI---LYHESFVR 168
GGE + LN W P T+ P+ LYH F +
Sbjct: 252 GGELQKLNAWFGPEGTVTPLHHDLYHNLFAQ 282
>07_03_1124 +
24157441-24157483,24157989-24158020,24158135-24158353,
24158553-24158634,24158726-24158898
Length = 182
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 145 VLXEELXGERASGSGIGILPPSPLGLST 62
++ L G A+ G G PPSP GL+T
Sbjct: 44 LIGNSLSGRTATPHGYGAPPPSPAGLAT 71
>01_03_0285 -
14604499-14604608,14604692-14605203,14605339-14605418,
14605597-14605699,14605759-14605907,14606088-14606180,
14606289-14606675,14607690-14608124,14608198-14608311,
14608405-14608453,14608684-14608843,14608941-14609499
Length = 916
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 431 GMSYGV-LRKTIHVNCDVTRVLHYKSNYFYLLGLYFGFPYRPHH 303
G++ GV L H+ CD R+LH + L+ +FG P++
Sbjct: 444 GVAVGVALHAGAHLTCDFPRLLHASDAQYELMKPFFGEKRPPNY 487
>09_06_0302 -
22144271-22144543,22144946-22145083,22146004-22146278,
22146486-22146957
Length = 385
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 264 SGRFTSGRVSHSCGDIPPHPFTHCNSVATSLLP 166
+G+FT GR GD+ T+C A +P
Sbjct: 105 AGKFTGGRTGSIAGDLRDGAVTYCKPPAVGYVP 137
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 57 SSVLRPNGDGGRMPMPEPLALSPXNSSXNTLP 152
SS P G GG P P SP + S T P
Sbjct: 268 SSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTP 299
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 316 IVPITNAADGP--GGFSGYFRTLHVRASLTLVRRHPSAPLY 200
IV + A G G SG FRT+ + +++L+ + +AP+Y
Sbjct: 252 IVGVYKALPGKSKGSVSGVFRTVLIANNVSLMNKEANAPVY 292
>11_06_0757 +
26964983-26965048,26965470-26965874,26966921-26967814,
26972063-26972512,26973013-26973637,26994014-26994651,
26994967-26995032
Length = 1047
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 158 ASSGRREVATELQWVKGCGG---MSPHECETRPDVKRPEVTTKAPGAVRRICDGDDT 319
+ +GRR ++ W++G GG M E R RP + G + + DGDDT
Sbjct: 574 SGNGRRIAEKKVDWLEGRGGTALMPALEEAIRVLDCRPGDSRNRVGFILLLTDGDDT 630
>10_02_0094 -
5228472-5228703,5229040-5229133,5230627-5230675,
5231229-5231321,5231404-5231635,5232416-5232506,
5232693-5232784,5232862-5232970,5233331-5233430,
5233614-5233754,5233846-5234010,5234088-5234279,
5234409-5234537,5234619-5234734,5234821-5234965,
5235039-5235102,5235241-5235463,5235584-5236244,
5236909-5237250
Length = 1089
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 146 STMRASSGRREVATELQWVKGCGGMSPHECETRPDVKRPEVTTKAPGAVRRICD 307
S + A++ A +L W++ GG SP E E + + V KA G + D
Sbjct: 84 SAVAAAAALLAAALQLVWLRWRGGDSPEEEEVSHEHDKRIVNNKALGTSTDLLD 137
>07_01_0880 + 7301042-7301548
Length = 168
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 173 SSRTKLSW*SIGRRVGWGESQWFRHRHSPPIPIGPKYRRGPVGLSQG 33
+S + SW S G + W S R R PP P YRR +G G
Sbjct: 94 TSSSSCSWASSGGWMSWLTSFRRRQRWLPPSPGKTTYRRRWLGQDGG 140
>02_04_0398 - 22598895-22599100,22599865-22599943
Length = 94
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Frame = +1
Query: 25 PHRPCDKPTGPRLYLGPMGMGGECR--CL---NHW 114
P RP D+P P + G GG CR C NHW
Sbjct: 53 PDRPWDRPDRPWDHRPHPGPGGHCRWGCCGHRNHW 87
>02_01_0278 -
1851338-1851412,1851579-1851819,1851946-1852047,
1852291-1852364,1852455-1852592,1852848-1853003,
1853364-1853513,1853808-1853867,1853946-1854073,
1854209-1854617,1855571-1855628,1856435-1856493,
1857478-1857606,1857765-1857774,1858134-1858183,
1858633-1858854
Length = 686
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 12 RQHCTASPLRQAHRASSVLRPNGDGGRMPMPEPLAL 119
R+ TAS + +S P GDGG +P P AL
Sbjct: 17 RRGRTASAYQPLRSSSLARHPGGDGGLEVVPGPFAL 52
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 116 SLPXQLFXQYSTMRASSGRREVATELQWVKGCGGMSPH 229
SLP +F Y+ + R +V+ + W GG S H
Sbjct: 219 SLPTSVFV-YTLVNTGKDRAKVSLLMTWANSIGGFSHH 255
>09_04_0679 - 19398696-19399303,19400425-19400596
Length = 259
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 311 DDTGIQNKDLTNRNSYSCNEGHV*RHSLRVSSCVEHHRTSPPSCNI 448
D G+ D+ + C EGH R + R + R+S +CN+
Sbjct: 86 DQNGVYKLDVPAAGGFDCREGHDLRSACRATLV----RSSSAACNV 127
>09_04_0582 -
18694158-18694256,18694522-18694560,18695564-18695707,
18695783-18695914,18696882-18697103,18697496-18697963
Length = 367
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 85 GGECRCLNHWLSPXPTLRPILYHE 156
GGE + LN W P T+ P L+H+
Sbjct: 292 GGELQSLNAWFGPHGTVTP-LHHD 314
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 284 GAVRRICDGDDT 319
G VR++CDGDDT
Sbjct: 138 GLVRKLCDGDDT 149
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 145 VLXEELXGERASGSGIGIL---PPSPLGLSTDEARWACRRGDAV 23
V+ E+ R++ G+ ++ PP+P GL+ ++A W DA+
Sbjct: 240 VVPEDAEVIRSTNRGVPLVLNDPPTPAGLALEQATWRLVERDAM 283
>05_04_0286 + 19833114-19834053,19834149-19834165
Length = 318
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 209 CGGM-SPHECETRPDVKRPEVTTKAPGAVRRICDG 310
CG S C++ D RP + AP A+ +C G
Sbjct: 275 CGDWNSTSNCDSSADAARPNAASAAPRAIVALCLG 309
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 231 SVRLART*SVRK*PLKPPGPSAAFVMGTIRES 326
S+ RT + RK P PP P GT+R S
Sbjct: 29 SIASTRTKTTRKSPPAPPPPRPRRAFGTVRSS 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,584,421
Number of Sequences: 37544
Number of extensions: 413149
Number of successful extensions: 1328
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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