Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F03
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.1  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   2.8  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   4.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   4.9  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 361 KPNGPIPKNYFFHLSVENLNGNENDVPVVSRFVL 462
           KP G   K +FF  S++  N    ++P+  +  L
Sbjct: 612 KPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTL 645


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 361 KPNGPIPKNYFFHLSVENLNGNENDVPVVSRFVL 462
           KP G   K +FF  S++  N    ++P+  +  L
Sbjct: 612 KPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTL 645


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 286 LFRNIFPFQLQSRLLYKPKLTTPC 215
           ++ N+ P Q  S  L  P+LT  C
Sbjct: 7   MYNNVSPLQCTSPFLGGPQLTDVC 30


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = +1

Query: 256 EAEMEIYFEK----EVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLNG 423
           E E ++Y  K    + R     ++ +  E   ++   +I  N  +  NY ++ +  N N 
Sbjct: 44  EREQKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNN 103

Query: 424 NEN 432
           N N
Sbjct: 104 NYN 106


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +1

Query: 256 EAEMEIYFEK----EVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLN 420
           E E ++Y  K    + R     ++ +  E   ++   +I  N P+  NY ++ +  N N
Sbjct: 44  EREQKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYN 102


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 315 ILRYVNYPNFFF 280
           +++Y+N+  FFF
Sbjct: 6   VIKYINFDRFFF 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,195
Number of Sequences: 438
Number of extensions: 3489
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)