Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F02
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.6  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   2.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.8  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    23   5.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 326  KHRYQVKGKHQLLALVEHHDK 388
            K R  V+ KH LLA +EH ++
Sbjct: 1620 KGRLYVRQKHDLLAAIEHSNR 1640


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 451 RYHTRGCILVLKCNSPRISQLFVVMFHQC*ELMFALDLVTVFG 323
           R  +RG I   K  + +++ + V++F  C       DL+ VFG
Sbjct: 438 RASSRGIIPRAKVKTVKMTIVIVIVFVLCWSPYIIFDLLQVFG 480


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +2

Query: 344 KGKHQLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTRQ 478
           K + +   L++ H+K+L + R    Q +     +V+ ++ T+T+Q
Sbjct: 681 KKRSEYSQLIQEHEKELADFRAELKQTEANINSIVSEMQKTETKQ 725


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 305 IKCSSQTKHRYQVKGKHQLLALVEHH 382
           IK   +T+H  +V G++ LL    HH
Sbjct: 106 IKSQHETRHGDEVHGQYSLLDSDGHH 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,331
Number of Sequences: 2352
Number of extensions: 13445
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)