Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F01
         (564 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F...    36   0.074
BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein pr...    30   4.9  
BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription ...    30   4.9  
BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.        30   4.9  
AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.     30   4.9  
BC059402-1|AAH59402.1|  842|Homo sapiens round spermatid basic p...    29   8.5  

>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
            protein protein.
          Length = 4590

 Score = 36.3 bits (80), Expect = 0.074
 Identities = 16/50 (32%), Positives = 31/50 (62%)
 Frame = -3

Query: 400  GESXIVVLRSQEDLDNGISGNIGLNVDGNTERLVVESWLTNLEVVWVTSL 251
            G S ++ +R+  D D+G +G +  ++D +    V+ES+  N+E  W+T+L
Sbjct: 2826 GGSRVIQIRAS-DADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTL 2874


>BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein
            protein.
          Length = 2150

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 20   ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 199
            AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 929  ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 988

Query: 200  YSQ 208
            Y Q
Sbjct: 989  YGQ 991


>BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription
            complex, subunit 1 protein.
          Length = 1551

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 20   ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 199
            AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 934  ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993

Query: 200  YSQ 208
            Y Q
Sbjct: 994  YGQ 996


>BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.
          Length = 1620

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 20  ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 199
           AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 178 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 237

Query: 200 YSQ 208
           Y Q
Sbjct: 238 YGQ 240


>AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.
          Length = 1835

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 20  ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 199
           AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 393 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 452

Query: 200 YSQ 208
           Y Q
Sbjct: 453 YGQ 455


>BC059402-1|AAH59402.1|  842|Homo sapiens round spermatid basic
           protein 1-like protein.
          Length = 842

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 182 LVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPR 292
           L  F DY  F+  NS  L KK+I+T+   NF  +  R
Sbjct: 411 LPDFLDYFSFNFPNSPVLGKKDIETTTMSNFHAQVKR 447


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,882,702
Number of Sequences: 237096
Number of extensions: 1491525
Number of successful extensions: 9970
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9970
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)