Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E24
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032627-1|AAH32627.1|  295|Homo sapiens glycine N-methyltransfe...   117   2e-26
AL158815-2|CAI19462.1|  295|Homo sapiens glycine N-methyltransfe...   117   2e-26
AF101477-1|AAF78290.1|  295|Homo sapiens glycine N-methyltransfe...   117   2e-26
AF101475-1|AAF78289.1|  295|Homo sapiens glycine N-methyltransfe...   117   2e-26
X62250-1|CAA44164.1|  263|Homo sapiens liver glycine methyltrans...   106   3e-23

>BC032627-1|AAH32627.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score =  117 bits (282), Expect = 2e-26
 Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +2

Query: 11  DQRIQKMCLKNFAKCLKPGGLLFIDHRNYDAMIDSG-ATPGHSIYYNCKYPVDIKTSVLV 187
           DQ   ++ LKN A  ++ GGLL IDHRNYD ++ +G A PG +IYY      D+ TSVL+
Sbjct: 152 DQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLI 211

Query: 188 VSGKPKLIALDYCIDT--TSDEELNDKSEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYA 361
           V+ K  ++ LDY +       +     S+FRL YYPH L+ FT++L  AF  + +H +  
Sbjct: 212 VNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFTELLQAAFGGKCQHSVLG 271

Query: 362 DFKSIH--EVPVPAFYIHVMEK 421
           DFK     +  +P ++IHV+++
Sbjct: 272 DFKPYKPGQTYIPCYFIHVLKR 293


>AL158815-2|CAI19462.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score =  117 bits (282), Expect = 2e-26
 Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +2

Query: 11  DQRIQKMCLKNFAKCLKPGGLLFIDHRNYDAMIDSG-ATPGHSIYYNCKYPVDIKTSVLV 187
           DQ   ++ LKN A  ++ GGLL IDHRNYD ++ +G A PG +IYY      D+ TSVL+
Sbjct: 152 DQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLI 211

Query: 188 VSGKPKLIALDYCIDT--TSDEELNDKSEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYA 361
           V+ K  ++ LDY +       +     S+FRL YYPH L+ FT++L  AF  + +H +  
Sbjct: 212 VNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFTELLQAAFGGKCQHSVLG 271

Query: 362 DFKSIH--EVPVPAFYIHVMEK 421
           DFK     +  +P ++IHV+++
Sbjct: 272 DFKPYKPGQTYIPCYFIHVLKR 293


>AF101477-1|AAF78290.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score =  117 bits (282), Expect = 2e-26
 Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +2

Query: 11  DQRIQKMCLKNFAKCLKPGGLLFIDHRNYDAMIDSG-ATPGHSIYYNCKYPVDIKTSVLV 187
           DQ   ++ LKN A  ++ GGLL IDHRNYD ++ +G A PG +IYY      D+ TSVL+
Sbjct: 152 DQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLI 211

Query: 188 VSGKPKLIALDYCIDT--TSDEELNDKSEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYA 361
           V+ K  ++ LDY +       +     S+FRL YYPH L+ FT++L  AF  + +H +  
Sbjct: 212 VNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFTELLQAAFGGKCQHSVLG 271

Query: 362 DFKSIH--EVPVPAFYIHVMEK 421
           DFK     +  +P ++IHV+++
Sbjct: 272 DFKPYKPGQTYIPCYFIHVLKR 293


>AF101475-1|AAF78289.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score =  117 bits (282), Expect = 2e-26
 Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +2

Query: 11  DQRIQKMCLKNFAKCLKPGGLLFIDHRNYDAMIDSG-ATPGHSIYYNCKYPVDIKTSVLV 187
           DQ   ++ LKN A  ++ GGLL IDHRNYD ++ +G A PG +IYY      D+ TSVL+
Sbjct: 152 DQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLI 211

Query: 188 VSGKPKLIALDYCIDT--TSDEELNDKSEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYA 361
           V+ K  ++ LDY +       +     S+FRL YYPH L+ FT++L  AF  + +H +  
Sbjct: 212 VNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFTELLQAAFGGKCQHSVLG 271

Query: 362 DFKSIH--EVPVPAFYIHVMEK 421
           DFK     +  +P ++IHV+++
Sbjct: 272 DFKPYKPGQTYIPCYFIHVLKR 293


>X62250-1|CAA44164.1|  263|Homo sapiens liver glycine
           methyltransferase protein.
          Length = 263

 Score =  106 bits (255), Expect = 3e-23
 Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
 Frame = +2

Query: 11  DQRIQKMCLKNFAKCLKPGGLLFIDHRNYDAMIDSG-ATPGHSIYYNCKYPVDIKTSVLV 187
           DQ   ++ LKN A  ++ GGLL  DHRNYD ++ +G A PG +IYY      D+ TSVL+
Sbjct: 121 DQSEHRLALKNIASMVRAGGLLVSDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLI 180

Query: 188 VSGKPKLIALDYCIDT--TSDEELNDKSEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYA 361
           V+ K  ++ LDY +       +     S+FRL YYPH L+ FT+    +F  + +H +  
Sbjct: 181 VNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFTES-PSSFGGKCQHSVLG 239

Query: 362 DFKSIH--EVPVPAFYIHVMEK 421
           DFK     +  +P ++IHV+++
Sbjct: 240 DFKPYKPGQTYIPCYFIHVLKR 261


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,511,926
Number of Sequences: 237096
Number of extensions: 1035162
Number of successful extensions: 2245
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)