Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E24
(443 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.0
AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical... 28 2.7
Z96047-8|CAC42278.1| 507|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z96047-7|CAB09413.1| 561|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical pr... 27 8.1
U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical p... 27 8.1
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 8.1
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 134 SIYYNCKYPVDIKTSVLVVSGKPKLIALDYCIDT 235
+I +P+DI V + GKP I DY IDT
Sbjct: 13983 TISVTLNHPIDISKVVWLKDGKPLEINKDYSIDT 14016
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 134 SIYYNCKYPVDIKTSVLVVSGKPKLIALDYCIDT 235
+I +P+DI V + GKP I DY IDT
Sbjct: 13983 TISVTLNHPIDISKVVWLKDGKPLEINKDYSIDT 14016
>AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical
protein Y53F4B.42 protein.
Length = 311
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 26 KMCLKNFAKCLKPGG-LLFIDHRNYD 100
K LKN + LKPGG LL D+ YD
Sbjct: 210 KNALKNLVRLLKPGGSLLLKDYGRYD 235
>Z96047-8|CAC42278.1| 507|Caenorhabditis elegans Hypothetical
protein DY3.4b protein.
Length = 507
Score = 27.1 bits (57), Expect = 6.1
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 133 MSRCSSTVDHSVIVPVID 80
+S+C STV+H V++ +ID
Sbjct: 280 VSKCFSTVNHDVLISIID 297
>Z96047-7|CAB09413.1| 561|Caenorhabditis elegans Hypothetical
protein DY3.4a protein.
Length = 561
Score = 27.1 bits (57), Expect = 6.1
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 133 MSRCSSTVDHSVIVPVID 80
+S+C STV+H V++ +ID
Sbjct: 334 VSKCFSTVNHDVLISIID 351
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 358 IYVVLGTIVERLVKHFCEF*QFMWIVAQSEFALIIKLF-IRGSIYTVIQRDQLW 200
+Y V T++ ++ H C Q++ + +S ALI+ L + SI I+ + W
Sbjct: 300 VYCVALTLLISVIVHHCFEKQYLQLGIKSVIALILVLIALNASIQYTIRYENFW 353
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 358 IYVVLGTIVERLVKHFCEF*QFMWIVAQSEFALIIKLF-IRGSIYTVIQRDQLW 200
+Y V T++ ++ H C Q++ + +S ALI+ L + SI I+ + W
Sbjct: 300 VYCVALTLLISVIVHHCFEKQYLQLGIKSVIALILVLIALNASIQYTIRYENFW 353
>Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical
protein F14H8.6 protein.
Length = 695
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 242 DEELNDKSEFRLCYYPHKLSKFTKMLDEAFD 334
DE N E + + H++ K TKM+D+A D
Sbjct: 619 DESFNGPIEDYMEHLEHEILKITKMIDQAED 649
>Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical
protein C11E4.3 protein.
Length = 411
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 164 DIKTSVLVVSGKPKLIALDYCIDTTSDEELNDKSEFRLCYYPHKLSKFTKMLDEAF 331
DIK S+ +S K L++ + + E +ND + F Y H L+ + K+ E +
Sbjct: 118 DIKESLPDISDKTADDLLEFFVAGSGLENMNDVTYFNRTYLSH-LNNYYKIWSEGY 172
>U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical
protein F45E4.7b protein.
Length = 505
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 258 IRANSDCATIHINCQNSQKCLTRRSTI 338
+ NS +IH NC NS + RR+ +
Sbjct: 479 VAENSRMFSIHFNCNNSSRLYNRRTCL 505
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 258 IRANSDCATIHINCQNSQKCLTRRSTI 338
+ NS +IH NC NS + RR+ +
Sbjct: 758 VAENSRMFSIHFNCNNSSRLYNRRTCL 784
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 258 IRANSDCATIHINCQNSQKCLTRRSTI 338
+ NS +IH NC NS + RR+ +
Sbjct: 842 VAENSRMFSIHFNCNNSSRLYNRRTCL 868
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,772,098
Number of Sequences: 27780
Number of extensions: 189040
Number of successful extensions: 512
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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