Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E23
         (92 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069142-1|AAL39287.1|  482|Drosophila melanogaster GH15861p pro...    26   8.1  
AE013599-461|AAM71102.1|  482|Drosophila melanogaster CG1358-PC,...    26   8.1  
AE013599-460|AAM71101.1|  482|Drosophila melanogaster CG1358-PB,...    26   8.1  
AE013599-459|AAF59224.1|  482|Drosophila melanogaster CG1358-PA,...    26   8.1  

>AY069142-1|AAL39287.1|  482|Drosophila melanogaster GH15861p
           protein.
          Length = 482

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 12  LVLAGLIALVQSSVVSPKTYHFK 80
           +VLAG++  V S +V  KT+ FK
Sbjct: 328 IVLAGMLGSVVSGIVLDKTHKFK 350


>AE013599-461|AAM71102.1|  482|Drosophila melanogaster CG1358-PC,
           isoform C protein.
          Length = 482

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 12  LVLAGLIALVQSSVVSPKTYHFK 80
           +VLAG++  V S +V  KT+ FK
Sbjct: 328 IVLAGMLGSVVSGIVLDKTHKFK 350


>AE013599-460|AAM71101.1|  482|Drosophila melanogaster CG1358-PB,
           isoform B protein.
          Length = 482

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 12  LVLAGLIALVQSSVVSPKTYHFK 80
           +VLAG++  V S +V  KT+ FK
Sbjct: 328 IVLAGMLGSVVSGIVLDKTHKFK 350


>AE013599-459|AAF59224.1|  482|Drosophila melanogaster CG1358-PA,
           isoform A protein.
          Length = 482

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 12  LVLAGLIALVQSSVVSPKTYHFK 80
           +VLAG++  V S +V  KT+ FK
Sbjct: 328 IVLAGMLGSVVSGIVLDKTHKFK 350


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,042,334
Number of Sequences: 53049
Number of extensions: 30393
Number of successful extensions: 147
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 24,988,368
effective HSP length: 12
effective length of database: 24,351,780
effective search space used: 438332040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)