Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E23
         (92 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   5.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   7.1  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    18   9.4  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    18   9.4  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +1

Query: 46  PVWCHRKRITSRQKM 90
           P WC R  +    KM
Sbjct: 338 PAWCDRVLLNPTDKM 352


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 47  GLHEGNEP 24
           GLH  NEP
Sbjct: 164 GLHRANEP 171


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 22  RGSLPSCNP 48
           RG+ P C+P
Sbjct: 77  RGACPQCSP 85


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 22  RGSLPSCNP 48
           RG+ P C+P
Sbjct: 77  RGACPQCSP 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,331
Number of Sequences: 438
Number of extensions: 138
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 12
effective length of database: 141,087
effective search space used:  2539566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)