BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0001_E20 (546 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.0 X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 9.3 U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 9.3 U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.3 EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 9.3 AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 9.3 AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 9.3 >AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein protein. Length = 1156 Score = 21.8 bits (44), Expect = 4.0 Identities = 11/32 (34%), Positives = 13/32 (40%) Frame = +3 Query: 180 IANPDPFFSQPSNGPSGNYEPISTGPAFVDFN 275 I NP P + PSN + S P D N Sbjct: 416 IINPQPQITSPSNTNTSTSSTNSNKPNSSDLN 447 >X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium castaneum mRNAfor alhpa amylase 3'region. ). Length = 489 Score = 20.6 bits (41), Expect = 9.3 Identities = 5/10 (50%), Positives = 7/10 (70%) Frame = +2 Query: 299 IRQPSRPWWE 328 + +RPWWE Sbjct: 67 VTSSNRPWWE 76 >U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II protein. Length = 490 Score = 20.6 bits (41), Expect = 9.3 Identities = 5/10 (50%), Positives = 7/10 (70%) Frame = +2 Query: 299 IRQPSRPWWE 328 + +RPWWE Sbjct: 68 VTSSNRPWWE 77 >U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I protein. Length = 490 Score = 20.6 bits (41), Expect = 9.3 Identities = 5/10 (50%), Positives = 7/10 (70%) Frame = +2 Query: 299 IRQPSRPWWE 328 + +RPWWE Sbjct: 68 VTSSNRPWWE 77 >EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxylase protein. Length = 532 Score = 20.6 bits (41), Expect = 9.3 Identities = 6/13 (46%), Positives = 8/13 (61%) Frame = +3 Query: 264 VDFNHPNYPPKRY 302 +D NHP + K Y Sbjct: 217 LDMNHPGFADKEY 229 >AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. Length = 456 Score = 20.6 bits (41), Expect = 9.3 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +3 Query: 210 PSNGPSGNYEPIST 251 P GPSG Y P T Sbjct: 407 PHAGPSGAYSPDGT 420 >AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthologue protein. Length = 431 Score = 20.6 bits (41), Expect = 9.3 Identities = 11/50 (22%), Positives = 21/50 (42%) Frame = +3 Query: 81 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSG 230 +H H + + ++ + N P +SDH + + +P PSG Sbjct: 313 MHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHHLKQEPSG 362 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 126,474 Number of Sequences: 336 Number of extensions: 2840 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 13411456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -