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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E19
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z50797-3|CAC35828.1|  802|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z50797-2|CAA90672.1|  800|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical...    29   2.8  
Z81116-12|CAB03309.1|  414|Caenorhabditis elegans Hypothetical p...    28   6.4  
Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF067618-2|AAC19195.1|  920|Caenorhabditis elegans Nuclear hormo...    27   8.4  

>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
           protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 472 SDGRRSRIFVDELLETRRRQEKAVPADCSARYHAR*RGNN*CWNAHVHTW 621
           S GRR +   D     RRR+ + V  DC    H R R ++  +  H+H W
Sbjct: 79  SYGRRGKR--DVTSTDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRW 126


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
           protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 472 SDGRRSRIFVDELLETRRRQEKAVPADCSARYHAR*RGNN*CWNAHVHTW 621
           S GRR +   D     RRR+ + V  DC    H R R ++  +  H+H W
Sbjct: 79  SYGRRGKR--DVTSTDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRW 126


>Z50797-3|CAC35828.1|  802|Caenorhabditis elegans Hypothetical
           protein T22H6.2b protein.
          Length = 802

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 464 DFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQDDEGT 589
           D +  V  L  +S N L L GGK  +    A HA++Q+  GT
Sbjct: 479 DCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQEALGT 520


>Z50797-2|CAA90672.1|  800|Caenorhabditis elegans Hypothetical
           protein T22H6.2a protein.
          Length = 800

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 464 DFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQDDEGT 589
           D +  V  L  +S N L L GGK  +    A HA++Q+  GT
Sbjct: 477 DCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQEALGT 518


>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
           protein R10E11.1b protein.
          Length = 2056

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 468 KSMQESDGSSNV-ALSASDSLVLFLSPSIRTDDSSNPTTCA 349
           KS  +SD  S + ALSA +SL  F + S  TD  +NP+T A
Sbjct: 8   KSRADSDYDSGLDALSALESLEAFPTSSKDTDVDNNPSTSA 48


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
           protein R10E11.1a protein.
          Length = 2045

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 468 KSMQESDGSSNV-ALSASDSLVLFLSPSIRTDDSSNPTTCA 349
           KS  +SD  S + ALSA +SL  F + S  TD  +NP+T A
Sbjct: 8   KSRADSDYDSGLDALSALESLEAFPTSSKDTDVDNNPSTSA 48


>AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical
           protein Y43F8C.16 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
 Frame = -1

Query: 603 IPALVVPSSSCMIACAAVCRNCFLLPPSSFK*FVDENTRPSTV*TKSMQESDGSSNVALS 424
           I +  VP SS  +  + +     L+P S+       + R ST+       S GSSN    
Sbjct: 244 ITSTTVPESSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTI------TSTGSSN---P 294

Query: 423 ASDSLVLFLSPSIRTDDSSNPTTC-ARFPPHLSSGVTVTIDIDIPRFSNN 277
            S S V   + S  T   S+P+T  A   P L+S +T  +    P  +++
Sbjct: 295 PSTSTVPSTTTSTTTPKPSSPSTAEASTTPVLTSNLTSALTSTSPLLASS 344


>Z81116-12|CAB03309.1|  414|Caenorhabditis elegans Hypothetical
           protein T06C12.13 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 371 ESSVLMLGDKKRTKESEALRATLELPSDSCIDFVQTVD 484
           E SV M G++  TK   A+     +  DSCID+ +  D
Sbjct: 248 EMSVKMFGNQVLTKRKFAISNEKLMVMDSCIDYSEITD 285


>Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical
           protein C29E6.4 protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 216 DTVKRTCLTAPARNGRSRSDFSLKTILDKPSFILSVSIKSI 94
           D  +  C+   AR    R +F +    D PSF +S+ +KSI
Sbjct: 166 DYYENNCVHPTARCPNGRIEFVVTRKADVPSFGISLGVKSI 206


>AF067618-2|AAC19195.1|  920|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 266 protein.
          Length = 920

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +2

Query: 5   KLHFDDKERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIKLGLSNIVLSEKSLLDLPF 178
           K+  + +E + + P +K   + F   +  + DFM +++ +  LS I    K + ++PF
Sbjct: 600 KIKQEIEETWSKYPELKKSLEKFRSNKMKLDDFMISVRTEKNLSQIGSIYKEVSNIPF 657


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,223,201
Number of Sequences: 27780
Number of extensions: 273799
Number of successful extensions: 845
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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