BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0001_E19 (633 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.6 Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.6 Z50797-3|CAC35828.1| 802|Caenorhabditis elegans Hypothetical pr... 30 1.6 Z50797-2|CAA90672.1| 800|Caenorhabditis elegans Hypothetical pr... 30 1.6 Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 30 1.6 Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 30 1.6 AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 2.8 Z81116-12|CAB03309.1| 414|Caenorhabditis elegans Hypothetical p... 28 6.4 Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 27 8.4 AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormo... 27 8.4 >Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein F25H8.3 protein. Length = 2165 Score = 29.9 bits (64), Expect = 1.6 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +1 Query: 472 SDGRRSRIFVDELLETRRRQEKAVPADCSARYHAR*RGNN*CWNAHVHTW 621 S GRR + D RRR+ + V DC H R R ++ + H+H W Sbjct: 79 SYGRRGKR--DVTSTDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRW 126 >Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical protein F25H8.3 protein. Length = 2165 Score = 29.9 bits (64), Expect = 1.6 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +1 Query: 472 SDGRRSRIFVDELLETRRRQEKAVPADCSARYHAR*RGNN*CWNAHVHTW 621 S GRR + D RRR+ + V DC H R R ++ + H+H W Sbjct: 79 SYGRRGKR--DVTSTDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRW 126 >Z50797-3|CAC35828.1| 802|Caenorhabditis elegans Hypothetical protein T22H6.2b protein. Length = 802 Score = 29.9 bits (64), Expect = 1.6 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 464 DFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQDDEGT 589 D + V L +S N L L GGK + A HA++Q+ GT Sbjct: 479 DCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQEALGT 520 >Z50797-2|CAA90672.1| 800|Caenorhabditis elegans Hypothetical protein T22H6.2a protein. Length = 800 Score = 29.9 bits (64), Expect = 1.6 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 464 DFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQDDEGT 589 D + V L +S N L L GGK + A HA++Q+ GT Sbjct: 477 DCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQEALGT 518 >Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein R10E11.1b protein. Length = 2056 Score = 29.9 bits (64), Expect = 1.6 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -1 Query: 468 KSMQESDGSSNV-ALSASDSLVLFLSPSIRTDDSSNPTTCA 349 KS +SD S + ALSA +SL F + S TD +NP+T A Sbjct: 8 KSRADSDYDSGLDALSALESLEAFPTSSKDTDVDNNPSTSA 48 >Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein R10E11.1a protein. Length = 2045 Score = 29.9 bits (64), Expect = 1.6 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -1 Query: 468 KSMQESDGSSNV-ALSASDSLVLFLSPSIRTDDSSNPTTCA 349 KS +SD S + ALSA +SL F + S TD +NP+T A Sbjct: 8 KSRADSDYDSGLDALSALESLEAFPTSSKDTDVDNNPSTSA 48 >AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical protein Y43F8C.16 protein. Length = 370 Score = 29.1 bits (62), Expect = 2.8 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 1/110 (0%) Frame = -1 Query: 603 IPALVVPSSSCMIACAAVCRNCFLLPPSSFK*FVDENTRPSTV*TKSMQESDGSSNVALS 424 I + VP SS + + + L+P S+ + R ST+ S GSSN Sbjct: 244 ITSTTVPESSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTI------TSTGSSN---P 294 Query: 423 ASDSLVLFLSPSIRTDDSSNPTTC-ARFPPHLSSGVTVTIDIDIPRFSNN 277 S S V + S T S+P+T A P L+S +T + P +++ Sbjct: 295 PSTSTVPSTTTSTTTPKPSSPSTAEASTTPVLTSNLTSALTSTSPLLASS 344 >Z81116-12|CAB03309.1| 414|Caenorhabditis elegans Hypothetical protein T06C12.13 protein. Length = 414 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 371 ESSVLMLGDKKRTKESEALRATLELPSDSCIDFVQTVD 484 E SV M G++ TK A+ + DSCID+ + D Sbjct: 248 EMSVKMFGNQVLTKRKFAISNEKLMVMDSCIDYSEITD 285 >Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical protein C29E6.4 protein. Length = 906 Score = 27.5 bits (58), Expect = 8.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -1 Query: 216 DTVKRTCLTAPARNGRSRSDFSLKTILDKPSFILSVSIKSI 94 D + C+ AR R +F + D PSF +S+ +KSI Sbjct: 166 DYYENNCVHPTARCPNGRIEFVVTRKADVPSFGISLGVKSI 206 >AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormone receptor familyprotein 266 protein. Length = 920 Score = 27.5 bits (58), Expect = 8.4 Identities = 14/58 (24%), Positives = 30/58 (51%) Frame = +2 Query: 5 KLHFDDKERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIKLGLSNIVLSEKSLLDLPF 178 K+ + +E + + P +K + F + + DFM +++ + LS I K + ++PF Sbjct: 600 KIKQEIEETWSKYPELKKSLEKFRSNKMKLDDFMISVRTEKNLSQIGSIYKEVSNIPF 657 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,223,201 Number of Sequences: 27780 Number of extensions: 273799 Number of successful extensions: 845 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 813 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 843 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1395683256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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