Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E19
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.26 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    26   0.35 
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    26   0.35 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.3  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   5.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   5.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.7  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             22   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2

Query: 485 RRPSERNQCRSQM 447
           RRPS RN C SQM
Sbjct: 402 RRPSRRNSCESQM 414


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
 Frame = +2

Query: 398 KKRTKESEALRATLELPSDSC-IDFVQTVDGLVFSSTNY---LKLDGGKRKQFLQTAAHA 565
           K+   E+E     L L   +  ++ + T    +F S+     L LDG   + FL+   H 
Sbjct: 75  KQEFDETERASGDLSLGQKTIDLELIGTQAEGIFGSSEECVALDLDGQGGRTFLRVLLHL 134

Query: 566 IMQDDEGTTSAGMHMYIR 619
            M D     S  +H+  R
Sbjct: 135 AMHDYPPLVSGALHLLFR 152


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
 Frame = +2

Query: 398 KKRTKESEALRATLELPSDSC-IDFVQTVDGLVFSSTNY---LKLDGGKRKQFLQTAAHA 565
           K+   E+E     L L   +  ++ + T    +F S+     L LDG   + FL+   H 
Sbjct: 43  KQEFDETERASGDLSLGQKTIDLELIGTQAEGIFGSSEECVALDLDGQGGRTFLRVLLHL 102

Query: 566 IMQDDEGTTSAGMHMYIR 619
            M D     S  +H+  R
Sbjct: 103 AMHDYPPLVSGALHLLFR 120


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 238 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQT 128
           EL++A L+  Q         E +IQK+  T N I +T
Sbjct: 766 ELVEAILKRVQTPFDPDVPIELQIQKQSHTPNGIVKT 802


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 612 YMCIPALVVPSSSCMIACA 556
           ++C+PA  + S S +++CA
Sbjct: 45  HLCLPAPRINSKSPLLSCA 63


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 612 YMCIPALVVPSSSCMIACA 556
           ++C+PA  + S S +++CA
Sbjct: 45  HLCLPAPRINSKSPLLSCA 63


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 465 SMQESDGSSNVALSASDSLVLFLSPSIRT 379
           S+ +++      +S  D LVL+ +PSI T
Sbjct: 156 SISQANEGFCAVISMHDGLVLYTTPSICT 184


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 465 SMQESDGSSNVALSASDSLVLFLSPSIRT 379
           S+ +++      +S  D LVL+ +PSI T
Sbjct: 151 SISQANEGFCAVISMHDGLVLYTTPSICT 179


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 152 HSKQYWTNQVLF*VYP 105
           ++K +W N + + VYP
Sbjct: 20  NNKGWWKNAIFYQVYP 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,456
Number of Sequences: 438
Number of extensions: 3264
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)