BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E17
(487 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0862 - 7172083-7172931 32 0.21
10_01_0320 + 3506183-3507109 32 0.28
10_01_0322 + 3516922-3517899 31 0.65
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 30 0.86
10_01_0329 - 3599571-3600554 30 0.86
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 30 0.86
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 30 0.86
05_04_0146 + 18393447-18394043 29 2.0
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 2.0
04_04_0765 - 27910189-27912393,27912521-27912598 29 2.0
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 29 2.0
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 29 2.0
08_02_0279 - 15249361-15249612,15251270-15251506,15252704-152527... 29 2.6
05_06_0278 + 26894802-26895362 29 2.6
01_07_0117 + 41171919-41172395 29 2.6
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 29 2.6
02_03_0279 + 17250347-17252098 28 3.5
12_02_0758 - 22858221-22858367,22859362-22859460,22859505-228595... 28 4.6
11_04_0227 + 15094941-15095445,15095773-15095865,15096209-150963... 28 4.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 4.6
09_06_0081 + 20745627-20748144,20748211-20748308 28 4.6
09_02_0082 - 4060018-4061604 28 4.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 4.6
07_01_0645 - 4807411-4807613,4808214-4808691 28 4.6
04_04_0690 - 27300048-27300929 28 4.6
07_03_1386 - 26192019-26192073,26192272-26192397,26192570-261926... 27 6.0
06_01_0636 + 4627533-4628546 27 6.0
03_03_0023 + 13839421-13840326 27 6.0
01_06_0781 + 31962661-31963089,31963174-31963228,31964310-319645... 27 6.0
01_06_0349 - 28613059-28614240 27 6.0
10_08_0870 - 21178136-21178534 27 8.0
10_08_0436 - 17910948-17911583,17914699-17914929 27 8.0
07_03_1430 - 26503732-26504754 27 8.0
07_03_0560 + 19479597-19480667 27 8.0
06_03_1004 - 26832638-26833183,26833373-26833569,26833636-268338... 27 8.0
04_04_0430 - 25153572-25154060 27 8.0
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 27 8.0
>07_01_0862 - 7172083-7172931
Length = 282
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRK 118
P PLPP ++PL+ P L PL P+ P P ++
Sbjct: 160 PLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQPPLPEKE 198
>10_01_0320 + 3506183-3507109
Length = 308
Score = 31.9 bits (69), Expect = 0.28
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSYER 157
PAP PPA R +P + TAS T A RP R Y + + YE+
Sbjct: 6 PAPAPPASRKRAAAPDHEPTASRSSTPAAAAGAKRPRR---YALASVDDYEQ 54
>10_01_0322 + 3516922-3517899
Length = 325
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSYER 157
PAP PPA R +P + TA T T P A RP R Y + + YE+
Sbjct: 8 PAPAPPASRKRAAAPDDEPTA----TGSTTPAAKRPRR---YALASVDDYEQ 52
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 30.3 bits (65), Expect = 0.86
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 PAPLPPAQRPLIPS-PALDGTASPLRTSCTVPRAPRPMRKQ 121
PAP PP PL PS P P + T PRAP P Q
Sbjct: 551 PAPSPPHD-PLAPSLPQAPAATPPQDPALTPPRAPTPTPPQ 590
>10_01_0329 - 3599571-3600554
Length = 327
Score = 30.3 bits (65), Expect = 0.86
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSYER 157
PAP PPA R +P + TA+ T A RP R Y + + YE+
Sbjct: 6 PAPAPPASRKRAAAPDDEPTATGSTTPAAAAGAKRPRR---YALASVDDYEQ 54
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 30.3 bits (65), Expect = 0.86
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRP 109
P P+PPA P IP+P++ P TVP A P
Sbjct: 527 PIPMPPAPAPPIPTPSMPFPTVP-APPVTVPPATAP 561
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPA 49
PAP PP PL P+PA
Sbjct: 299 PAPAPPVPTPLAPTPA 314
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 30.3 bits (65), Expect = 0.86
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQS 136
P P PP R +P+P T +P R V AP P R T S
Sbjct: 129 PPPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPS 173
>05_04_0146 + 18393447-18394043
Length = 198
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMR 115
PA LPP+ P P P + A+ S + P AP P R
Sbjct: 79 PASLPPSASP--PPPEREAAAAMAAASASPPWAPSPAR 114
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPL---RTSCTVPRAPRP 109
P P PP P P P SPL T+ T P AP P
Sbjct: 81 PPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVP 119
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 8 PLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQ 121
P PP P+ PS + GT+ P RT+CT P +R +
Sbjct: 555 PSPPRVSPVPPSASGAGTSLP-RTTCTPPTGGEWLRPE 591
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 8 PLPPAQRPL-IPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTN 145
PL P P+ +P P T +P T P P P+ T + TN
Sbjct: 295 PLYPEPTPVTMPDPTTTTTPTPFMNPVTAPTMPSPVTNPATTPAVTN 341
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQ 121
P + P+Q+P+ PSP T PL+ P P +Q
Sbjct: 167 PGTVFPSQQPMQPSPMTTSTVFPLQQPLPQPTVIEPSARQ 206
>08_02_0279 -
15249361-15249612,15251270-15251506,15252704-15252772,
15252845-15252895,15254009-15254056,15254187-15254267,
15256219-15256257,15256486-15256551,15258113-15258236,
15258576-15258696,15258771-15258900,15259692-15259853
Length = 459
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 14 PPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQF--YTQSFTNSY 151
PP R P PA DG A P + V P P Y + +T ++
Sbjct: 39 PPVLRHSQPEPAADGEAHPTSSKKNVQEIPTPQYDDVDTYERDYTRTF 86
>05_06_0278 + 26894802-26895362
Length = 186
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 5 APLPP-AQRPLIPSPALDGTASPLRTSCTVPRAPRP 109
AP PP + RP+ P +DG S R P +P+P
Sbjct: 79 APPPPQSNRPVTPLAGVDGGVSGGRAPTNTPPSPQP 114
>01_07_0117 + 41171919-41172395
Length = 158
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 2 PAP-LPPAQRPLIPSPA--LDGTA-SPLRTSCTVPRAPRP 109
PAP L P PL+PSP DG+A +P T+P +P P
Sbjct: 65 PAPALSPDIMPLLPSPGPDSDGSAEAPSDVMPTIPSSPSP 104
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRP 109
P P PP P+ P+ ++ + P + ++P +PRP
Sbjct: 81 PPPPPPPPVPVPPAYSVTSSVPPYSMTSSLPPSPRP 116
>02_03_0279 + 17250347-17252098
Length = 583
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASP 70
P P PP PL P LD TA P
Sbjct: 127 PPPPPPPPPPLFAKPDLDSTAPP 149
>12_02_0758 -
22858221-22858367,22859362-22859460,22859505-22859557,
22859674-22859728,22860204-22860284,22860779-22861213
Length = 289
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 5 APLPPAQRPLIPSPALDGTASPLRTSCTVPRA 100
+P+P Q P + +PA T++PL + T+P A
Sbjct: 48 SPVPRFQNPNLQAPAAHYTSTPLTSCHTLPAA 79
>11_04_0227 +
15094941-15095445,15095773-15095865,15096209-15096308,
15096799-15096874,15099906-15100017,15100924-15101012,
15101137-15101223,15101623-15101678,15102114-15102462
Length = 488
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 5 APLPPAQRPLIPSPALDGTASP 70
APLPPA P +PSP TASP
Sbjct: 444 APLPPATPPRVPSP----TASP 461
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRP 109
P P PP L+PSP P+ + +VP P P
Sbjct: 588 PPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTV-PRAPRP 109
P P+PP L+P+P G + + TV P RP
Sbjct: 360 PVPMPPTPTRLVPTPPAPGPPADVPPRFTVSPTTTRP 396
>09_02_0082 - 4060018-4061604
Length = 528
Score = 27.9 bits (59), Expect = 4.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASP 70
P P+PPA P +P+P++ P
Sbjct: 418 PIPMPPAPAPPVPTPSMPSPTVP 440
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALD 55
PAP PP PL P+P D
Sbjct: 188 PAPAPPVPTPLAPAPPAD 205
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 2 PAPLPPAQRPLIPS--PALDGTASPLRTSCTVPRAPRPM 112
P+ PP Q PL PS PA PL S P P P+
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPL 1188
>07_01_0645 - 4807411-4807613,4808214-4808691
Length = 226
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 11 LPPAQRPLIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSYERS 160
+PP PL+ + A+ +A+ P +P P ++F+ FTN + S
Sbjct: 1 MPPPPPPLLLAAAVLASAAAALADPPPPPSPTPWPERFHAVLFTNLTQTS 50
>04_04_0690 - 27300048-27300929
Length = 293
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 108 GRGAR-GTVHDVRSGEAVPSSAGDGISGRWAGGSGAG 1
G GA+ G R+G A S AG + G AGGS AG
Sbjct: 70 GAGAKVGVATGARTG-AASSGAGADVGGAVAGGSAAG 105
>07_03_1386 -
26192019-26192073,26192272-26192397,26192570-26192622,
26192722-26192807,26192896-26193017,26193096-26193155,
26193787-26193866,26193949-26194087,26194273-26194367,
26194792-26194860,26195015-26195131,26195839-26195913,
26196590-26196961
Length = 482
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 102 GARGTVHDVRSGEAVPSSAGDGISGRWAGGSGAG 1
GA R G + S G G GR GG GAG
Sbjct: 3 GAEEEAAAARGGGSGSESGGSGGGGRGGGGGGAG 36
>06_01_0636 + 4627533-4628546
Length = 337
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRAP 103
P PLPPA +P G PL ++ P P
Sbjct: 28 PLPLPPAATTTTSAPPAGGAMHPLASAGAAPPPP 61
>03_03_0023 + 13839421-13840326
Length = 301
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASPLRTSCTVPRA 100
PAP P + L+PSP++ A+ + + VP A
Sbjct: 46 PAPAPAPEHVLLPSPSVAAGAAEVLLAAGVPPA 78
>01_06_0781 +
31962661-31963089,31963174-31963228,31964310-31964557,
31965080-31965281,31965793-31965912,31965976-31966100,
31966182-31966288,31966726-31966792
Length = 450
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 2 PAP-LPPAQRPLIPSPALDGTASPLRTSCTVPRA--PRPMRK 118
P+P LPP SP + SPLR + +P A PRP R+
Sbjct: 82 PSPGLPPLPSRRSSSPFAISSPSPLRPAAAMPPADLPRPPRR 123
>01_06_0349 - 28613059-28614240
Length = 393
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 114 RMGRGARGTVHDVRSGEAVPSSAGDGISGRWAGGSG 7
RMG GA V G S +G + G GG+G
Sbjct: 36 RMGSGASAVVDAAEPGAEADSGSGGRVCGGGGGGAG 71
>10_08_0870 - 21178136-21178534
Length = 132
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTAS 67
P+P PPA RP P+P G +S
Sbjct: 26 PSPKPPAPRPKPPTPHYGGGSS 47
>10_08_0436 - 17910948-17911583,17914699-17914929
Length = 288
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 5 APLPPAQRPLIPSPALDGTASPLRTSCTVPRAPRP 109
+PL R + + AL G S SCTV R P P
Sbjct: 247 SPLSHGFRAMCAATALGGGNSTAAASCTVVRIPSP 281
>07_03_1430 - 26503732-26504754
Length = 340
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 159 DRS*EFVNDCV*NCFRMGRGARG 91
DR+ E V D V N R GRG RG
Sbjct: 46 DRAEEIVRDAVKNAIRGGRGDRG 68
>07_03_0560 + 19479597-19480667
Length = 356
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 108 GRGARGTVHDVRSGEAVPSSAGDGISGRWAGGSGAG 1
GRG G HD R G G G G + GG G G
Sbjct: 46 GRGP-GFGHDCRFGRCRGGGGGFGGDGGFGGGGGGG 80
>06_03_1004 -
26832638-26833183,26833373-26833569,26833636-26833861,
26833943-26834072,26835884-26836188
Length = 467
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 114 RMGRGARGTVHDVRSGEAVPSSAGDGISGRWAGGSG 7
++GR A G + +R+GE +P GR GG G
Sbjct: 44 QLGR-ATGRMRKLRAGERIPGGGRPPARGREGGGGG 78
>04_04_0430 - 25153572-25154060
Length = 162
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTA 64
P+P PP RP P P+ D A
Sbjct: 130 PSPPPPPPRPATPPPSFDDAA 150
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSP-ALDGTASPLRTSCTVPRAPRP 109
P+P PPA +P P P + T +P R+ A +P
Sbjct: 62 PSPSPPAGKPTKPHPESTPPTKTPARSKPAAAAAEKP 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,435,775
Number of Sequences: 37544
Number of extensions: 234648
Number of successful extensions: 1499
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -