BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E17
(487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK093802-1|BAC04225.1| 675|Homo sapiens protein ( Homo sapiens ... 31 2.8
AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled recep... 30 5.0
AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled recep... 30 5.0
AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled recep... 30 5.0
AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled recep... 30 5.0
AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled recep... 30 5.0
AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled recep... 30 5.0
AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled rece... 30 5.0
AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled rece... 30 5.0
AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein. 30 5.0
AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein. 30 5.0
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein. 30 5.0
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 29 6.6
BC000765-1|AAH00765.1| 601|Homo sapiens chromosome 1 open readi... 29 6.6
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 29 6.6
AY352640-1|AAR11484.1| 601|Homo sapiens specifically androgen-r... 29 6.6
AK093826-1|BAC04233.1| 601|Homo sapiens protein ( Homo sapiens ... 29 6.6
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 29 6.6
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 29 6.6
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 29 6.6
AB023209-1|BAA76836.1| 772|Homo sapiens KIAA0992 protein protein. 29 8.7
>AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens cDNA
FLJ44660 fis, clone BRACE3002344, weakly similar to
Vegetatible incompatibility protein HET-E-1. ).
Length = 1060
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASP 70
PAP PPAQ +IPSPA+ G+ P
Sbjct: 985 PAPSPPAQ--MIPSPAVTGSQRP 1005
>AK093802-1|BAC04225.1| 675|Homo sapiens protein ( Homo sapiens
cDNA FLJ36483 fis, clone THYMU2017601. ).
Length = 675
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTASP 70
PAP PPAQ +IPSPA+ G+ P
Sbjct: 600 PAPSPPAQ--MIPSPAVTGSQRP 620
>AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 2159 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2205
>AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled receptor
GPR112 protein.
Length = 2799
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 2095 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2141
>AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 1954 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2000
>AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 2159 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2205
>AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 1954 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2000
>AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 2159 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2205
>AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 1954 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2000
>AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 11 LPPAQRP---LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFT 142
+P A P +IP P LD + + T+ TVP A P+ T FT
Sbjct: 2159 IPTASSPSTLIIPKPTLDSLLNIMTTTSTVPGASFPLISTGVTYPFT 2205
>AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTAS-PLRTSCTVPRAPRP 109
P P PP R P PA G+A+ P +PR+P P
Sbjct: 793 PPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLP 829
>AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTAS-PLRTSCTVPRAPRP 109
P P PP R P PA G+A+ P +PR+P P
Sbjct: 793 PPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLP 829
>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
Length = 1015
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 PAPLPPAQRPLIPSPALDGTAS-PLRTSCTVPRAPRP 109
P P PP R P PA G+A+ P +PR+P P
Sbjct: 905 PPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLP 941
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 PAPLPPAQRPLIPS--PALDGTASPLRTSCTVPRAPRP 109
P PLPP P +PS P A+PL P AP P
Sbjct: 134 PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 171
>BC000765-1|AAH00765.1| 601|Homo sapiens chromosome 1 open reading
frame 116 protein.
Length = 601
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 2 PAPLP-PAQRPL-IPSPALDGTASPLRTSCTVPRAPR 106
PAP P PAQ PL + SPA A+ +P+APR
Sbjct: 414 PAPAPGPAQGPLPMKSPAPGNVAASKSMPIPIPKAPR 450
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 PAPLPPAQRP----LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSY 151
PAPLPP P IP+P T +P+ T P P+ +F SY
Sbjct: 770 PAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASY 823
>AY352640-1|AAR11484.1| 601|Homo sapiens specifically
androgen-regulated protein protein.
Length = 601
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 2 PAPLP-PAQRPL-IPSPALDGTASPLRTSCTVPRAPR 106
PAP P PAQ PL + SPA A+ +P+APR
Sbjct: 414 PAPAPGPAQGPLPMKSPAPGNVAASKSMPIPIPKAPR 450
>AK093826-1|BAC04233.1| 601|Homo sapiens protein ( Homo sapiens
cDNA FLJ36507 fis, clone TRACH2001101. ).
Length = 601
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 2 PAPLP-PAQRPL-IPSPALDGTASPLRTSCTVPRAPR 106
PAP P PAQ PL + SPA A+ +P+APR
Sbjct: 414 PAPAPGPAQGPLPMKSPAPGNVAASKSMPIPIPKAPR 450
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 PAPLPPAQRP----LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSY 151
PAPLPP P IP+P T +P+ T P P+ +F SY
Sbjct: 770 PAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASY 823
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 PAPLPPAQRP----LIPSPALDGTASPLRTSCTVPRAPRPMRKQFYTQSFTNSY 151
PAPLPP P IP+P T +P+ T P P+ +F SY
Sbjct: 756 PAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASY 809
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 PAPLPPAQRPLIPS--PALDGTASPLRTSCTVPRAPRP 109
P PLPP P +PS P A+PL P AP P
Sbjct: 679 PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 716
>AB023209-1|BAA76836.1| 772|Homo sapiens KIAA0992 protein protein.
Length = 772
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 14 PPAQRPLIPSPALDGT-ASPLRTSCTVPRAPRPM 112
PPA R PSP A P +CT P +P PM
Sbjct: 68 PPAPRSAPPSPPFPPPPAFPELAACTPPASPEPM 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,778,373
Number of Sequences: 237096
Number of extensions: 1195511
Number of successful extensions: 5085
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4990
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -