Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E15
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-5|CAB03796.1|  294|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U80839-7|AAB37915.1|  306|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AF125448-5|AAD12810.1|  188|Caenorhabditis elegans Hypothetical ...    27   7.3  
U41508-8|AAG00026.4|  553|Caenorhabditis elegans Abnormal catech...    27   9.7  
U41508-7|AAP46273.2|  490|Caenorhabditis elegans Abnormal catech...    27   9.7  
AF067607-6|AAY86221.1|  461|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z81453-5|CAB03796.1|  294|Caenorhabditis elegans Hypothetical
           protein B0250.8 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 191 ILNSFNISITHKNETIGKQWKAGVKPRLVLKG--LKKNSNDCE 313
           +LN F  +    ++ +G+ WKA V+ + V++G  L K   D E
Sbjct: 30  VLNQFQRTNQLNDDEMGRTWKAEVQEQRVIRGRTLVKGQQDAE 72


>U80839-7|AAB37915.1|  306|Caenorhabditis elegans Hypothetical
           protein ZC204.9 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 212 SITHKNETIG-KQWKAGVKPRLVLKGLKKNSNDCETMTNSFMES 340
           S++HKN  I  +QW  G  PRL    +    N  + + N+  E+
Sbjct: 217 SLSHKNRNIFMRQWINGSNPRLQYFAMLMGFNGVQQLENTLFEN 260


>AF125448-5|AAD12810.1|  188|Caenorhabditis elegans Hypothetical
           protein H14E04.3 protein.
          Length = 188

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = -2

Query: 384 LRLIQKKGLISFFAKDSIKLLVIVSQSLEFFFNPLSTNLGFTPAFHCLPIVSFLWVIDIL 205
           + LI     I  F      L V+ S  ++     + + + F P    L IV F  V+DI+
Sbjct: 75  ISLISISWTIWMFINTIFALFVVNSDIIQLVIKRIQSQIIFRP----LDIVKF--VLDII 128

Query: 204 NEFNIPSYNIYISLY 160
           + FNIP    +I ++
Sbjct: 129 HFFNIPISLYFICVF 143


>U41508-8|AAG00026.4|  553|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 1, isoform a protein.
          Length = 553

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 297 FFFNPLSTNLGFTPAFHCLPIVSFLW 220
           FF  PL  +LGF    + + ++SFL+
Sbjct: 466 FFSGPLVKSLGFPTMMYIIAVISFLY 491


>U41508-7|AAP46273.2|  490|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 1, isoform b protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 297 FFFNPLSTNLGFTPAFHCLPIVSFLW 220
           FF  PL  +LGF    + + ++SFL+
Sbjct: 403 FFSGPLVKSLGFPTMMYIIAVISFLY 428


>AF067607-6|AAY86221.1|  461|Caenorhabditis elegans Hypothetical
           protein C18H7.11 protein.
          Length = 461

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = -2

Query: 318 IVSQSLEFFFNPLSTNLG---FTPAFHCLPIVSFLWVIDILNEFNIPSYNIYIS 166
           + + +  FF NP+ +  G   F P    L I    W I  +  FN+   N Y+S
Sbjct: 194 VTNNTHTFFMNPVFSQNGLNVFFPNIEPLQIKLDYWYITSMGPFNMDLENRYVS 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,838,779
Number of Sequences: 27780
Number of extensions: 189359
Number of successful extensions: 432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)