Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E14
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039044-4|AAG24122.3|  328|Caenorhabditis elegans Serpentine re...    30   1.5  
U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine rece...    29   3.3  
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81575-4|CAB04630.1|  320|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AF039044-4|AAG24122.3|  328|Caenorhabditis elegans Serpentine
           receptor, class t protein17 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 126 LILVQICLVEVVNFSQICDQIAKTSLFL*IC 218
           LIL  ICL+ ++   QI     KT +FL IC
Sbjct: 60  LILYTICLIAIIKSDQIRTPAYKTMIFLGIC 90


>U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein18 protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 126 LILVQICLVEVVNFSQICDQIAKTSLFL*IC 218
           LIL  ICL+ +    Q+     KT +FL IC
Sbjct: 66  LILYSICLIAIAKSEQMLKPAYKTMMFLGIC 96


>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
            R10E8.6 protein.
          Length = 1696

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 373  LEEANRQLGHNNWVLTLEQLESFIAICYAR-GAYGV 269
            +E  + + GH NW L ++  E  +AI Y   GA G+
Sbjct: 1300 VEYGSEEFGHKNWHLPMDDREYRLAIRYQHCGAEGI 1335


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
            C01B9.1b protein.
          Length = 1671

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 370  EEANRQLGHNNWVLTLEQLESFIAICYAR-GAYGV 269
            E  N +LG+  W L +E  E  + I Y R G  GV
Sbjct: 1256 EYGNEELGNKRWYLPMENTEYQLDIIYLRCGRQGV 1290


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
            C01B9.1a protein.
          Length = 1601

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 370  EEANRQLGHNNWVLTLEQLESFIAICYAR-GAYGV 269
            E  N +LG+  W L +E  E  + I Y R G  GV
Sbjct: 1186 EYGNEELGNKRWYLPMENTEYQLDIIYLRCGRQGV 1220


>Z81575-4|CAB04630.1|  320|Caenorhabditis elegans Hypothetical
           protein R08H2.4 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 188 RKNFIISLNLSRGITFEKKCIPHVLLHNSV 277
           +KNF++S+++  G       IP +LLH+SV
Sbjct: 229 QKNFLLSMSIQFGSFLMLIIIPLILLHSSV 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,659,815
Number of Sequences: 27780
Number of extensions: 278923
Number of successful extensions: 791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)