Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E14
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    28   0.081
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    28   0.081
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.3  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 314 GKFYRYMLCSRCIRSCGVKHGEYIFFQKL 228
           G+F + +L    IRS G+K  EY+FF K+
Sbjct: 379 GRFAKLLLRLPAIRSIGLKCLEYLFFFKM 407


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 314 GKFYRYMLCSRCIRSCGVKHGEYIFFQKL 228
           G+F + +L    IRS G+K  EY+FF K+
Sbjct: 379 GRFAKLLLRLPAIRSIGLKCLEYLFFFKM 407


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 554 RYVMDTSNGTYSKWSSSTAQYHN*ASR 474
           R+V +  NG+ + W S     H  ASR
Sbjct: 335 RWVANVPNGSVTNWVSGNHDNHRVASR 361


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -1

Query: 580 FQDLITSIDGTSWTPQMGHTQSGRRARHNIITEQAGPTSNARRNFTGHLSD 428
           F D   +I  TS +   G + S   +  +       PTS    N+TG +SD
Sbjct: 69  FNDSAAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTSLGSENYTG-ISD 118


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 539 TSNGTYSKWSSSTAQYHN*ASRAYLKCSKKFYGTFV 432
           ++N  YS +++    Y+N  +  Y    KK Y  ++
Sbjct: 86  SNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYI 121


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 539 TSNGTYSKWSSSTAQYHN*ASRAYLKCSKKFYGTFV 432
           ++N  YS +++    Y+N  +  Y    KK Y  ++
Sbjct: 86  SNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYI 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,842
Number of Sequences: 438
Number of extensions: 3278
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)