Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E13
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040661-15|AAG24219.1|  174|Caenorhabditis elegans Hypothetical...    37   0.014
Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical p...    36   0.033
Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical pr...    35   0.057
U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z35598-6|CAA84654.1|  580|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z93393-8|CAB07697.2|  189|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z35598-4|CAA84653.1|  488|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL031630-7|CAA20982.1|  158|Caenorhabditis elegans Hypothetical ...    29   2.1  
U64849-8|AAC48047.2|  376|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U64837-3|AAB04837.1|  782|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z35598-3|CAA84655.3|  525|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AF040661-15|AAG24219.1|  174|Caenorhabditis elegans Hypothetical
           protein W10G11.12 protein.
          Length = 174

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 258 WSPNEPNNALSNEDCGSIFKNDGKLNDVYC-AHSYAFICEK 377
           W   EPNNAL  + C  ++     ++DV C + +  +IC K
Sbjct: 130 WRAGEPNNALGGQGCAQVYSTTNDMDDVGCGSTNQGYICGK 170


>Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical
           protein T04A8.3 protein.
          Length = 462

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 13/61 (21%)
 Frame = +3

Query: 246 GFSVWSPN-EPNNALSNEDC-------GSIFKNDGK-----LNDVYCAHSYAFICEKEIK 386
           GF  W+   EPN++  +E C        S++  D K     +ND+YC + + F+C KE  
Sbjct: 395 GFDYWAEKYEPNHSTDSERCLVQMSGSMSVWYGDNKPRNMQINDIYCNYEFKFLCGKEAT 454

Query: 387 T 389
           T
Sbjct: 455 T 455


>Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical
           protein D1054.7 protein.
          Length = 113

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 246 GFSVWSPNEPNNALSNEDCGSIFKNDGKLNDVYCAHS 356
           GF +W   EPNNA S EDC ++    G L D  C+ +
Sbjct: 67  GF-IWETGEPNNASSMEDCIAVDAVTGGLGDQLCSRT 102


>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 249 FSVWSPNEPNNALSNEDCGSIFKNDGKLNDVYCAHSYAFICEKEI 383
           F  W   +P+N   NE+C  +  + G+  D  C  +  F+C+K+I
Sbjct: 265 FYKWGKKQPDNQEHNENCVEV-DHSGQWTDKLCIITRPFVCKKKI 308


>Z35598-6|CAA84654.1|  580|Caenorhabditis elegans Hypothetical
           protein F10F2.8 protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
 Frame = +3

Query: 168 GFRAD--KPVGNSTKVFKTIFNQTLEEAGF-SVWS-PNEPNNALSNEDCGSI-------- 311
           GF  D  KP   S +VF  +    L    F   W+ PNEPN     E C  +        
Sbjct: 489 GFDTDDSKPCARS-RVFYWLHGVALNPPDFIEHWADPNEPNFLGDKEKCVVVMTGSEWTH 547

Query: 312 --FKNDGKLNDVYCAHSYAFICEKE 380
             F  + K+NDV C   Y F C KE
Sbjct: 548 WKFGINKKINDVSCGRRYPFFCGKE 572


>Z93393-8|CAB07697.2|  189|Caenorhabditis elegans Hypothetical
           protein Y48E1B.9 protein.
          Length = 189

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 2   WNQAYAECQAENAHLVVLNSEAEMLAVKNLTNT 100
           W+ A   CQ   AHL ++++EA+   V NL N+
Sbjct: 91  WDNAERHCQGFGAHLAIIDNEAKNGFVTNLINS 123


>Z35598-4|CAA84653.1|  488|Caenorhabditis elegans Hypothetical
           protein F10F2.6 protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
 Frame = +3

Query: 168 GFRAD--KPVGNSTKVFKTIFNQTLEEAGF-SVW-SPNEPNNALSNEDCGSI-------- 311
           GF  D  KP     +VF  +    L    F S W +  EPN   + E C  +        
Sbjct: 398 GFDTDDSKPCARF-RVFSWLHGVALNPPDFASNWMTDKEPNFVGNEEQCIVVMTGTPPQW 456

Query: 312 -FKNDGKLNDVYCAHSYAFICEKE 380
            +  D K+ND+ C   Y F C KE
Sbjct: 457 RYNGDKKINDIPCTDRYPFFCGKE 480


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +1

Query: 442 DIVFSLSVARLHC*NVYRPINNLGNITFIESFV*LISTFYAIIEIRAWYNNDLKSTST 615
           ++V SL  A     N    I    +  F+ + + L+S ++A++ IRA +NN++ S ST
Sbjct: 7   ELVESLRCASEGLTNALTSITVKVSFVFLATVI-LLSYYFAVLAIRALWNNNIFSNST 63


>AL031630-7|CAA20982.1|  158|Caenorhabditis elegans Hypothetical
           protein Y38H6C.8 protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 249 FSVWSPNEPNNALSNEDCGSIFKNDGKLNDVYCAHSYAFICE 374
           FS W P +P   L +  CG++  + GK     C     F+C+
Sbjct: 104 FSNWGPGQP---LEDRHCGTMLISTGKWFSQVCDERIQFLCQ 142


>U64849-8|AAC48047.2|  376|Caenorhabditis elegans Hypothetical
           protein K04A8.1 protein.
          Length = 376

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = -2

Query: 233 RLIEDCFKNFRTISDWFISSETSE--EKPRS 147
           R+ E    N+  +SDW+I+ + SE  EKPR+
Sbjct: 133 RMNEFLLYNYTALSDWYINDKNSEKGEKPRN 163


>U64837-3|AAB04837.1|  782|Caenorhabditis elegans Hypothetical
           protein T27E4.6 protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 174 RADKPVGNSTKVFKTIFNQTLEEAGFSVWSPNEP 275
           R+D   G+S K+ K+  NQ  +    + +SPNEP
Sbjct: 742 RSDNTDGSSKKIKKSPENQETDYQSRNAYSPNEP 775


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 2   WNQAYAECQAENAHLVVLNSEAEMLAVKNLTN 97
           W  A A C    AHL  ++SE E   V NL +
Sbjct: 204 WEDAEAACVLLGAHLTSVHSETENTFVANLAS 235


>Z35598-3|CAA84655.3|  525|Caenorhabditis elegans Hypothetical
           protein F10F2.5 protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = +3

Query: 168 GFRADKPVGNSTK-VFKTIFNQTLEEAGF--SVW-SPNEPNNALSNEDCGSIFKNDGKLN 335
           GF +DK    S + VF+ + +       F  + W SP EPN+AL +E+C  +    GK N
Sbjct: 459 GFSSDKESECSRRRVFEWLHDVAENPPNFLDAYWPSPYEPNHALVDEEC--LVMMSGKTN 516


>AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical
           protein Y59A8B.4 protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 189 VGNSTKVFKTIFNQTLEEAGFSVWSPNEPN-NALSNEDCGSIFKNDGKLNDVYCAHSYAF 365
           +G S+ +   +F  ++  AG S+    E   NA+   + GSIFK  G+L  +   ++YAF
Sbjct: 90  LGVSSIIQGHMFIVSICVAGVSILGFFESRYNAIVKRNRGSIFKTKGRLLYIVLHYTYAF 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,871,343
Number of Sequences: 27780
Number of extensions: 255518
Number of successful extensions: 735
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)