Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E11
(301 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 25 1.8
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 25 1.8
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 2.4
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 25 3.1
SPCC1840.06 |atp5||F0-ATPase delta subunit|Schizosaccharomyces p... 25 3.1
SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 24 4.2
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 24 4.2
SPBC725.14 |arg6||acetylglutamate synthase Arg6 |Schizosaccharom... 24 4.2
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 24 4.2
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 24 5.5
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 24 5.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 24 5.5
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 24 5.5
SPAC11E3.06 |map1||MADS-box transcription factor Map1|Schizosacc... 23 7.3
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 23 7.3
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 23 7.3
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 23 7.3
SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr 1||... 23 9.6
SPAP11E10.01 |||ornithine cyclodeaminase family |Schizosaccharom... 23 9.6
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 23 9.6
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 23 9.6
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 23 9.6
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 23 9.6
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 219 LLHNIERLA*KLIELVDRCLEHL 151
LLHNIE A + +EL +C + L
Sbjct: 88 LLHNIESNAKRFVELFSQCADAL 110
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1111
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 196 KSLDVVEKRVPSI--NLPPQTMYSETRQYV 279
+S+D+ K+V I L P+TMY +T YV
Sbjct: 305 QSIDLSNKKVCMIAATLRPETMYGQTNCYV 334
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 186 LIELVDRCLEHLNSWQGKLNPRGERFLTK*EIPSDYRVGFLD 61
++ L + SW GK +PR + F ++ E D+ G +D
Sbjct: 599 MLNLPPEVIRRKGSWTGKKDPREDMFRSRFE-KFDWTKGLID 639
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 110 FSPSEKYHRIIGLDSLILKYNFSVTSIPD 24
+ P E H+++GL S L+ + T I D
Sbjct: 80 YHPEENVHKVVGLSSAWLELDSEDTLIAD 108
>SPCC1840.06 |atp5||F0-ATPase delta subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 216
Score = 24.6 bits (51), Expect = 3.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 64 KESNPIIRWYFSLGEKSLATGIQLALPAVQMF 159
+ S PI SLG +SLAT A P VQ++
Sbjct: 6 RRSIPITARLPSLGIRSLATATASAHPPVQLY 37
>SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 325
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 136 ALPAVQMFETPIHQFDKFLCKSLDVV-EKRVPSINLPPQTMYSET 267
ALP +Q F+ IHQ K + ++ + LPP T T
Sbjct: 228 ALPGMQFFQRLIHQIQAVETKLISILGPTSLSEAALPPLTDVQRT 272
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 24.2 bits (50), Expect = 4.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 202 LDVVEKRVPSINLPPQTMYSETRQYVLRRA 291
L V+ PS+ +PP T+ + +Y L A
Sbjct: 257 LSVMYNHFPSVPIPPATVNDTSMEYYLPNA 286
>SPBC725.14 |arg6||acetylglutamate synthase Arg6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 43 EKLYFRIKESNPIIRWYFSLGEKSL 117
++L +R + +NP+ +WYF SL
Sbjct: 437 KELIWRSRLTNPVNKWYFERSVGSL 461
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 24.2 bits (50), Expect = 4.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 95 KYHRIIGLDSLILKYN 48
++H I+GL SL++ YN
Sbjct: 451 EFHAILGLYSLVISYN 466
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 23.8 bits (49), Expect = 5.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 285 TENVLSRFRIHRLWW*VDGRHSLLHNIERLA*KLIELVDRCLEHLNSWQGKLNP 124
T + + R + +L W + R L +++E L KLI+ +R + LN +++P
Sbjct: 192 TSHDMYRLQKRKLQWVKEERTMLANHLEALERKLIDARNRKEKILNEIVKQVDP 245
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 214 EKRVPSINLPPQTMYSETRQY 276
E R+ SINLPP + +T Y
Sbjct: 1378 ELRIDSINLPPAIVTPDTINY 1398
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 46 KLYFRIKESNPIIRWYFSLGEKSLATGIQL 135
++YF +K S I+ F +G+K +G +L
Sbjct: 80 QVYFTVKPSEGIVSSSFKVGDKVYLSGDKL 109
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 178 FDKFLCKSLDVVEKRVP-SINLPPQTMYSE 264
F KF C SL + EKR + P+ YSE
Sbjct: 34 FKKFKCPSLVISEKRKELPLRKKPRVNYSE 63
>SPAC11E3.06 |map1||MADS-box transcription factor
Map1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 230 PSTYHHRRCIRKRDNTFSVGRT 295
PSTY HRR + K T S +T
Sbjct: 272 PSTYKHRRSLNKSFATRSEPQT 293
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 209 LW-RRECLPSTYHHRRCIRKRDNTFSVGRTL 298
LW EC+PS+ + C KR F + TL
Sbjct: 190 LWCNNECIPSSIPNCACGAKRQLEFQILPTL 220
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 23.4 bits (48), Expect = 7.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 221 LFSTTSSDLHKNLSNWW 171
+F TS +KN+ +WW
Sbjct: 88 MFDVTSRITYKNVPHWW 104
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 129 NPRGERFLTK*EIPSDY 79
N R ER+ T IPSDY
Sbjct: 46 NQRTERYFTNIMIPSDY 62
>SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 467
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 213 HNIERLA*KLIELVDRCLEHLNSWQGKLNPRGERFLTK 100
H ++ LA + + L + WQ K+ P F+T+
Sbjct: 24 HAVQNLAEHYMSHGFQYLSEKSDWQSKIEPGNSYFVTR 61
>SPAP11E10.01 |||ornithine cyclodeaminase family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 330
Score = 23.0 bits (47), Expect = 9.6
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 7 SIPIVESGIDVTEKLYFRIKESNPI--IR-WYFSL-GEKSLATGIQLALPAVQMFETPIH 174
S+ I+ SG V EKL PI +R W KSLA+ LP++Q+ PI
Sbjct: 134 SLLIIGSG-KVAEKLIHAHCSVRPIRSVRIWNHRFESAKSLASRASKELPSIQIDAVPIQ 192
Query: 175 QFDKFLCKSLDVV 213
+ + K D++
Sbjct: 193 NLENAV-KCSDII 204
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 219 LLHNIERLA*KLIELVDRCLEHLNSWQGKLNPRGERFLT 103
LL +RL +EL+ L N + N GE F+T
Sbjct: 786 LLEIHQRLQRHFVELLRPALSERNDEEAIFNQNGESFVT 824
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 240 TTTDDVFGNETIRSPS 287
TTT +FGN T + PS
Sbjct: 578 TTTGGLFGNTTAQQPS 593
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 211 VEKRVPSINLPPQTMYSETRQYVLRRADSV 300
+ + +P++ PP +SET Y DS+
Sbjct: 227 IHESLPALQNPPIQSHSETDLYADEELDSI 256
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 128 IPVARDFSPSEKYHRIIGLDSLI 60
IPV +DF + Y RI LDS+I
Sbjct: 383 IPVNQDFKALQSYRRI--LDSVI 403
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,465,371
Number of Sequences: 5004
Number of extensions: 30356
Number of successful extensions: 109
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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