Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E09
(255 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c... 27 0.40
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 1.2
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 25 1.6
SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator Tip4... 25 2.1
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 2.1
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 24 2.8
SPBC16A3.06 |||tRNA specific adenosine deaminase |Schizosaccharo... 24 3.7
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 24 3.7
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 23 4.9
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 23 4.9
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 23 4.9
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 23 6.4
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 23 8.5
SPAC20H4.02 |||conserved fungal protein|Schizosaccharomyces pomb... 23 8.5
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 23 8.5
SPAC3G9.07c |hos2|hda1, phd1|histone deacetylase |Schizosaccharo... 23 8.5
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 23 8.5
SPBC15D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 8.5
>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 27.1 bits (57), Expect = 0.40
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 18 YRKANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSL---AMCSVQ 188
Y+ ++ ++ + ++R L L +T + +C K+ + I DL+ SL A +Q
Sbjct: 206 YKVTTVHKSYQRFATLLRRHL-LDKTAKRYHDLCEKRPYKYITTDLLSPSLTCFASDILQ 264
Query: 189 HLNHSTSTPSCPVRLTFT 242
+ TS+ S PV L T
Sbjct: 265 TVPEYTSSQSSPVLLPAT 282
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.4 bits (53), Expect = 1.2
Identities = 17/78 (21%), Positives = 28/78 (35%)
Frame = +3
Query: 21 RKANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNH 200
RK R+ ++ + + L + IC Q I L + C L H
Sbjct: 1063 RKIAHFESRRRYLTNLYEHIVLKAESHQICIICRDIIKQGFITTCGHLYCSFCLEAWLKH 1122
Query: 201 STSTPSCPVRLTFTKPHF 254
S+S P C +L ++
Sbjct: 1123 SSSCPMCKTKLNKNNAYY 1140
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 155 YEIVARHVLGAAPKPFDKHTFMPSALDFYQTA 250
Y +ARH L + FD HTF + FY A
Sbjct: 183 YARLARHGLSEPSEMFDIHTFRENPEIFYTFA 214
>SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator
Tip41|Schizosaccharomyces pombe|chr 3|||Manual
Length = 252
Score = 24.6 bits (51), Expect = 2.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 68 EKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLG 184
+K +N N W L+E+E+ + + +++ AR V G
Sbjct: 131 QKILNAGQNLWFNEIILFEDELADNGKSMFDVRARVVQG 169
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 24.6 bits (51), Expect = 2.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 75 QLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTP-SCPVRL 233
+L S TI P+C++ K + +N L+L+ + L TS P CP++L
Sbjct: 228 ELNASVTISG-IPVCIRSKEKMFLNPDCALTLSFICI-FLAQYTSIPLPCPLQL 279
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 24.2 bits (50), Expect = 2.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 98 WQENADLYEEEVTKDYQRSYE 160
WQ++ EEE+ + YQ+S++
Sbjct: 170 WQQSIKSIEEELVEKYQQSWK 190
>SPBC16A3.06 |||tRNA specific adenosine deaminase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 247 GLVKVKRTGHEGVLVEWFRCCTEHMASDNFIRSL 146
G+V+ K G V W + CT+ +A+ ++ L
Sbjct: 182 GIVRTK-PGRPDAPVSWSKSCTDKLAAKQYLSIL 214
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 23.8 bits (49), Expect = 3.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 98 WQENADLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFMP 223
W+ENADL VTK + R V + P+ + F P
Sbjct: 251 WKENADLTVRTVTKKQRNKNTKQTRVVKVSVPRDSFFNFFNP 292
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 23.4 bits (48), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 92 NYWQENADLYEEEVTKDYQR 151
N W + DLY EE++ D R
Sbjct: 470 NKWYQIQDLYVEEISSDMIR 489
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 23.4 bits (48), Expect = 4.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 36 NRMARKLISTMKRQLTLSETIGKRTPICMKKKLQR 140
N ++ S++++QLT + + R I KLQR
Sbjct: 429 NNRVSEINSSLEKQLTTQKELRSRFEILFPVKLQR 463
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 23.4 bits (48), Expect = 4.9
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 101 QENADLYEEEVTKDYQRSYEI 163
+E DL+ E + +DYQ++ E+
Sbjct: 66 EEGEDLFGEGMERDYQQNLEL 86
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 23.0 bits (47), Expect = 6.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 205 VEWFRCCTEHMASDNFI 155
V+W RCC E +SD+++
Sbjct: 531 VKWMRCCFE-PSSDDYV 546
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 22.6 bits (46), Expect = 8.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 111 PICMKKKLQRIINDLMKLSLAMCS 182
P+C+K KL ++ + LA C+
Sbjct: 595 PLCLKFKLSKVNQQKATVHLATCA 618
>SPAC20H4.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 250
Score = 22.6 bits (46), Expect = 8.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 112 GVLLPIVSDKVNCLFIVEINFLAIRFEFAFL*GL 11
GVL+ + C F+ E ++R + + L G+
Sbjct: 203 GVLIGFFGGAIACYFLWERTMFSLRMQLSILVGI 236
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 22.6 bits (46), Expect = 8.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 186 QHLNHSTSTPSC 221
+HL HST P C
Sbjct: 111 KHLKHSTKAPKC 122
>SPAC3G9.07c |hos2|hda1, phd1|histone deacetylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 22.6 bits (46), Expect = 8.5
Identities = 7/34 (20%), Positives = 20/34 (58%)
Frame = +2
Query: 29 KFESYGKKIDFHDEKAINFVGNYWQENADLYEEE 130
+ ++G+ +FH E ++F+ +NA+ + ++
Sbjct: 74 RMATFGEMSEFHREDYLDFLKRVTPDNAEQFADK 107
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 22.6 bits (46), Expect = 8.5
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +2
Query: 80 NFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAP 193
++V + ++ + + E + DY+R EI+ H+ + P
Sbjct: 316 DYVESSLRDGSFILEAHIQIDYKRILEIIIDHLGSSVP 353
>SPBC15D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 212
Score = 22.6 bits (46), Expect = 8.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 35 ESYGKKIDFHDEKAINFVGNYWQENADLYEEEVTK 139
+SYG+K D K +F G QE LY V K
Sbjct: 75 KSYGEKKITIDLKGTSFFGKSPQEAKVLYATPVDK 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,118,203
Number of Sequences: 5004
Number of extensions: 20396
Number of successful extensions: 76
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 49493712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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