Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E07
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    34   0.077
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    34   0.077
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    30   0.95 
U88311-8|AAB42341.2|  918|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein...    27   6.7  
AF016418-3|AAK18905.1|  210|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 20/84 (23%), Positives = 41/84 (48%)
 Frame = +1

Query: 292 ATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYVLNFGSKIYIGQSVEPRQRF 471
           A G TQ E+  VLG     + +  +F  +++++    +       +++++ Q+    Q +
Sbjct: 43  ACGSTQKELEDVLG----GSRIFEEFSGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDY 98

Query: 472 AAIAQEFYKTELKSVDFLNTEVAA 543
               ++ YK   +S+DF  TE AA
Sbjct: 99  LETVEKLYKASGESLDFSQTEQAA 122


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 20/84 (23%), Positives = 41/84 (48%)
 Frame = +1

Query: 292 ATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYVLNFGSKIYIGQSVEPRQRF 471
           A G TQ E+  VLG     + +  +F  +++++    +       +++++ Q+    Q +
Sbjct: 43  ACGSTQKELEDVLG----GSRIFEEFSGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDY 98

Query: 472 AAIAQEFYKTELKSVDFLNTEVAA 543
               ++ YK   +S+DF  TE AA
Sbjct: 99  LETVEKLYKASGESLDFSQTEQAA 122


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 355  VRRKFERIIKSLKKESSEYVLNFGSKIYIGQSVEPRQRFAAI 480
            +R+ ++R I  +K    E V+N  SKI +G++V P  +F +I
Sbjct: 7496 IRKSYKREIVVMKNSLEEKVINVFSKI-LGRNVAPTDKFESI 7536


>U88311-8|AAB42341.2|  918|Caenorhabditis elegans Hypothetical
           protein C10H11.1 protein.
          Length = 918

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 370 ERIIKSLKKESSEYVLNFGSKIYIGQSVEPRQRFAAIAQEFYKTELK 510
           ER+   + K S   + +FGS+IY+       +  +A AQE+ K  +K
Sbjct: 357 ERLSYEIMKPSEVLIFDFGSEIYVWTGRYSNKVSSAYAQEYAKQLMK 403


>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
           protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = +1

Query: 367 FERIIKSLKKESSEYVLN----FGSKIYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNTE 534
           +  +++ L K S  Y+      F +K+ IG+ + P+Q  A   Q+  +  + + D +N E
Sbjct: 368 YSEVVRYLTKNSIHYITRDNFLFNTKLVIGEFIVPKQTEADETQQEREFAMFTEDDINKE 427

Query: 535 V 537
           +
Sbjct: 428 L 428


>AF016418-3|AAK18905.1|  210|Caenorhabditis elegans Hypothetical
           protein C49G7.10 protein.
          Length = 210

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 148 DLDVFEPTIADYDKFDLTLTKRISSYSDKNF 240
           D  VF+  +A Y K+ L   KR  + +DKN+
Sbjct: 2   DKTVFQQDLAPYVKYSLNKKKRWETGNDKNY 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.134    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,098,776
Number of Sequences: 27780
Number of extensions: 196509
Number of successful extensions: 467
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)