Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E05
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 205 1e-52
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 202 8e-52
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 202 8e-52
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 202 8e-52
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 202 8e-52
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 202 8e-52
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 200 3e-51
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 191 2e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 103 5e-22
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 47 5e-05
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 205 bits (500), Expect = 1e-52
Identities = 88/108 (81%), Positives = 103/108 (95%)
Frame = +2
Query: 65 QGIF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVR 244
+ +F +MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR
Sbjct: 2 RSLFRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVR 61
Query: 245 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 62 VTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 109
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 111 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 170
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 171 KGAVDGGLSIPHS 183
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 202 bits (493), Expect = 8e-52
Identities = 87/102 (85%), Positives = 99/102 (97%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 164 KGAVDGGLSIPHS 176
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 202 bits (493), Expect = 8e-52
Identities = 87/102 (85%), Positives = 99/102 (97%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 164 KGAVDGGLSIPHS 176
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 202 bits (493), Expect = 8e-52
Identities = 87/102 (85%), Positives = 99/102 (97%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 164 KGAVDGGLSIPHS 176
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 202 bits (493), Expect = 8e-52
Identities = 87/102 (85%), Positives = 99/102 (97%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 164 KGAVDGGLSIPHS 176
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 202 bits (493), Expect = 8e-52
Identities = 87/102 (85%), Positives = 99/102 (97%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 164 KGAVDGGLSIPHS 176
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 200 bits (488), Expect = 3e-51
Identities = 86/102 (84%), Positives = 98/102 (96%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 105 bits (251), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 104 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 163
Query: 585 KGAVDGGLNVPHS 623
KGAVDGGL++PHS
Sbjct: 164 KGAVDGGLSIPHS 176
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 191 bits (466), Expect = 2e-48
Identities = 83/98 (84%), Positives = 95/98 (96%)
Frame = +2
Query: 83 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 262
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 263 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 376
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 103 bits (247), Expect = 5e-22
Identities = 48/72 (66%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Frame = +3
Query: 411 LVAERL--RLXGQXLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAM 584
L+A RL R +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+
Sbjct: 54 LLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL 113
Query: 585 KGAVDGGLNVPH 620
KGAVDGGL++PH
Sbjct: 114 KGAVDGGLSIPH 125
Score = 99.5 bits (237), Expect = 8e-21
Identities = 40/52 (76%), Positives = 50/52 (96%)
Frame = +2
Query: 233 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 388
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 52
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 47.2 bits (107), Expect = 5e-05
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +3
Query: 552 TTTGARVFGAMKGAVDGGLNVPHS 623
TTTG +VFGA+KGAVDGGL++PHS
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHS 24
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,209,507
Number of Sequences: 237096
Number of extensions: 1945998
Number of successful extensions: 12047
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12047
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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