Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E04
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 318 2e-87
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 309 7e-85
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 309 7e-85
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 306 5e-84
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 304 2e-83
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 304 3e-83
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 160 5e-40
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 160 5e-40
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 158 3e-39
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 154 4e-38
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 154 4e-38
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 153 6e-38
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 153 6e-38
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 153 1e-37
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 153 1e-37
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 153 1e-37
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 153 1e-37
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 151 3e-37
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 150 5e-37
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 150 5e-37
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 146 9e-36
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 146 9e-36
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 141 3e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 3e-32
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 77 8e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 77 8e-15
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 29 1.6
U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 27 6.5
AC024746-11|AAF60396.2| 111|Caenorhabditis elegans Hypothetical... 27 6.5
Z75529-7|CAE54888.1| 382|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75529-6|CAA99785.1| 269|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 27 8.6
AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein. 27 8.6
AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical... 27 8.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 318 bits (781), Expect = 2e-87
Identities = 146/155 (94%), Positives = 153/155 (98%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHLVS+TMSGVTT
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTT 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYR+LTVPELTQQMFDA N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MMAACDPRHGRYLTVAA+FRGRMS KEVDEQMLN+
Sbjct: 299 MMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNV 333
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFVEWIPNNVKTAVCDI
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKTAVCDI 356
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 309 bits (759), Expect = 7e-85
Identities = 143/155 (92%), Positives = 148/155 (95%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR ++QYRA+TVPELTQQ FDA N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MMAACDPRHGRYLT AAIFRGRMS KEVDEQMLNI
Sbjct: 299 MMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNI 333
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFV+WIPNNVKTAVCDI
Sbjct: 331 LNIQNKNSSYFVDWIPNNVKTAVCDI 356
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 309 bits (759), Expect = 7e-85
Identities = 143/155 (92%), Positives = 148/155 (95%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR ++QYRA+TVPELTQQ FDA N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MMAACDPRHGRYLT AAIFRGRMS KEVDEQMLNI
Sbjct: 299 MMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNI 333
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFV+WIPNNVKTAVCDI
Sbjct: 331 LNIQNKNSSYFVDWIPNNVKTAVCDI 356
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 306 bits (752), Expect = 5e-84
Identities = 140/155 (90%), Positives = 150/155 (96%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G++ YRALTV ELTQQMFDA N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MMAACDPRHGRYLTVAA+FRGRMS +EVDEQMLN+
Sbjct: 299 MMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNV 333
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +1
Query: 439 RKSMSRCLTSQNKNSSYFVEWIPNNVKTAVCDI 537
R+ + L QNKNSSYFVEWIPNNVKTAVCDI
Sbjct: 324 REVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDI 356
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 304 bits (747), Expect = 2e-83
Identities = 139/155 (89%), Positives = 150/155 (96%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G++ YRALTV ELTQQMFDA N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MMAACDPRHGRYLTVAA+FRGRMS +EVDEQML++
Sbjct: 299 MMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSV 333
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 439 RKSMSRCLTSQNKNSSYFVEWIPNNVKTAVCDI 537
R+ + L+ QNKNSSYFVEWIPNNVKTAVCDI
Sbjct: 324 REVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDI 356
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 304 bits (746), Expect = 3e-83
Identities = 138/155 (89%), Positives = 150/155 (96%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLS PTYGDLNHLVS+TMSGVTT
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTT 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G++ YRALTV ELTQQMFDA N
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MMAACDPRHGRYLTVAA+FRGRMS +EVD+QM+N+
Sbjct: 299 MMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNV 333
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +1
Query: 439 RKSMSRCLTSQNKNSSYFVEWIPNNVKTAVCDI 537
R+ + + QNKNSSYFVEWIPNNVKTAVCDI
Sbjct: 324 REVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDI 356
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 160 bits (389), Expect = 5e-40
Identities = 78/160 (48%), Positives = 109/160 (68%), Gaps = 1/160 (0%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTP-TYGDLNHLVSLTMSGVT 179
VVEPYNA LS+ L++N DE +CIDNEA++DIC LKL TYGDLNHL SL +SG+T
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 180 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAX 359
T RF G L D+RKL N PRLHFFM FAP+ +G +A ++ +LTQQ+ DA
Sbjct: 239 TFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAK 296
Query: 360 NMMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQE 479
N+M C+ G++L+ A I+RG+ + K+ EQ++++ ++
Sbjct: 297 NIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENED 335
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 160 bits (389), Expect = 5e-40
Identities = 78/160 (48%), Positives = 109/160 (68%), Gaps = 1/160 (0%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTP-TYGDLNHLVSLTMSGVT 179
VVEPYNA LS+ L++N DE +CIDNEA++DIC LKL TYGDLNHL SL +SG+T
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 180 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAX 359
T RF G L D+RKL N PRLHFFM FAP+ +G +A ++ +LTQQ+ DA
Sbjct: 239 TFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAK 296
Query: 360 NMMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQE 479
N+M C+ G++L+ A I+RG+ + K+ EQ++++ ++
Sbjct: 297 NIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENED 335
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 158 bits (383), Expect = 3e-39
Identities = 70/161 (43%), Positives = 106/161 (65%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L++S PTY +LN ++S +S +T
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITA 237
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S S + L+V E+T+ F+A N
Sbjct: 238 SLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLIS--SAHHEFLSVDEITKSCFEASN 295
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDP+HG+Y+ V ++RG + K+V + +I Q V
Sbjct: 296 QMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSV 336
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 65/161 (40%), Positives = 101/161 (62%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPAN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPRHG+Y+ V ++RG + K+V+ + I + +
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 65/161 (40%), Positives = 101/161 (62%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPAN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPRHG+Y+ V ++RG + K+V+ + I + +
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 153 bits (372), Expect = 6e-38
Identities = 65/161 (40%), Positives = 101/161 (62%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPAN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPRHG+Y+ V ++RG + K+V+ + I + +
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 153 bits (372), Expect = 6e-38
Identities = 65/161 (40%), Positives = 101/161 (62%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPAN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPRHG+Y+ V ++RG + K+V+ + I + +
Sbjct: 299 QMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 66/155 (42%), Positives = 99/155 (63%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
M CDPRHG+Y+ V +FRG + K+V+ + I
Sbjct: 301 QMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 335
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 153 bits (370), Expect = 1e-37
Identities = 66/155 (42%), Positives = 99/155 (63%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 180 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 239
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N
Sbjct: 240 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 299
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
M CDPRHG+Y+ V +FRG + K+V+ + I
Sbjct: 300 QMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 334
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 66/155 (42%), Positives = 99/155 (63%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
M CDPRHG+Y+ V +FRG + K+V+ + I
Sbjct: 301 QMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 335
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 66/155 (42%), Positives = 99/155 (63%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHN 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
M CDPRHG+Y+ V +FRG + K+V+ + I
Sbjct: 301 QMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATI 335
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 151 bits (366), Expect = 3e-37
Identities = 65/155 (41%), Positives = 101/155 (65%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
+VEPYN+ L+ H +E++D ++ +DNEA+YDIC R L L+ PTY +LN L++ +S VT
Sbjct: 186 MVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTA 245
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + +AP+ S + +TV E+TQQ F+
Sbjct: 246 SLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGA 305
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
M CDPR G+Y+ ++RG + K+V+ + ++
Sbjct: 306 QMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASV 340
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 150 bits (364), Expect = 5e-37
Identities = 65/161 (40%), Positives = 101/161 (62%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPAN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPR+G+Y+ V ++RG + K+V+ + I + V
Sbjct: 299 QMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSV 339
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 150 bits (364), Expect = 5e-37
Identities = 65/161 (40%), Positives = 101/161 (62%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPAN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPR+G+Y+ V ++RG + K+V+ + I + V
Sbjct: 299 QMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSV 339
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 146 bits (354), Expect = 9e-36
Identities = 65/161 (40%), Positives = 99/161 (61%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
+VEPYN+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +LN LV+ +S +T
Sbjct: 187 MVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITA 246
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + +APL S + TV ++T F+
Sbjct: 247 SLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGY 306
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPR G+Y+ V ++RG + K+++ + + + V
Sbjct: 307 QMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTV 347
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 146 bits (354), Expect = 9e-36
Identities = 65/161 (40%), Positives = 99/161 (61%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
+VEPYN+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +LN LV+ +S +T
Sbjct: 159 MVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITA 218
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + +APL S + TV ++T F+
Sbjct: 219 SLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGY 278
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPR G+Y+ V ++RG + K+++ + + + V
Sbjct: 279 QMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTV 319
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 141 bits (342), Expect = 3e-34
Identities = 59/155 (38%), Positives = 98/155 (63%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ L+ H +E +D ++ +DNEA+YD+C + L + P+Y +LN L++ +S +T
Sbjct: 184 VVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITA 243
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V ++T F+ N
Sbjct: 244 SLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKAN 303
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
M CDP G+Y+ V ++RG + K+V+ + ++
Sbjct: 304 QMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSV 338
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (325), Expect = 3e-32
Identities = 59/161 (36%), Positives = 99/161 (61%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
+VEPYN+ L+ H +E++D ++ +DNEA+Y+I L + +PTY LN L++ +S +T
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ +
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
M CDPR+G+Y+ ++RG + KE++ + I + +
Sbjct: 301 QMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAI 341
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 77.0 bits (181), Expect = 8e-15
Identities = 41/128 (32%), Positives = 64/128 (50%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VV PYN LS+ +L+EN D +DN AL+ + K TPT+ +N LV+ MS T
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
RF + +R L ++ PFP +HF +P+ R +V ++T+ + +
Sbjct: 244 PYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTS 301
Query: 363 MMAACDPR 386
MM + R
Sbjct: 302 MMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 77.0 bits (181), Expect = 8e-15
Identities = 41/128 (32%), Positives = 64/128 (50%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VV PYN LS+ +L+EN D +DN AL+ + K TPT+ +N LV+ MS T
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
RF + +R L ++ PFP +HF +P+ R +V ++T+ + +
Sbjct: 244 PYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTS 301
Query: 363 MMAACDPR 386
MM + R
Sbjct: 302 MMVSTASR 309
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 225 LAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMM-AACDPRHGRYL 401
L M PF LH +P + RG ++LT E+ +Q+ NM+ + + +G+ +
Sbjct: 6 LTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLT--EMHRQLLTKTNMIDSVIETYNGKPI 63
Query: 402 TVAAIFRGRMSXKEVDE 452
A + + KE DE
Sbjct: 64 PAAIEAKKKQIIKERDE 80
>U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical
protein T24H7.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 111 LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 287
L ++ T+ + H + LT G +N D R+L ++ F LH + +PL
Sbjct: 73 LFINVTTFENHTHCIELTQKGWRVASNRNDCMNGDFRQLDIHTKYFESLHTLLMDISPL 131
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 240 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAACDPRHG 392
+PFP+ HF PG P+ S A +P + M M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 240 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAACDPRHG 392
+PFP+ HF PG P+ S A +P + M M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 284 RGKSWHKEVETGEGNHVDGKFTK 216
R K WH++V NH+ GK K
Sbjct: 165 RTKEWHRQVTNDLRNHIVGKLVK 187
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 284 RGKSWHKEVETGEGNHVDGKFTK 216
R K WH++V NH+ GK K
Sbjct: 165 RTKEWHRQVTNDLRNHIVGKLVK 187
>AC024746-11|AAF60396.2| 111|Caenorhabditis elegans Hypothetical
protein Y110A2AL.10 protein.
Length = 111
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 311 VLSAATRCERGKSWHKEVETGEGNHVDGKFTKISIKLTGE 192
VL + E+G S ++ETG GNH G I ++L E
Sbjct: 51 VLQIVSLMEKGGSI--QLETGRGNHSPGNIPAIKLRLLQE 88
>Z75529-7|CAE54888.1| 382|Caenorhabditis elegans Hypothetical
protein C44H9.7b protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +3
Query: 69 CIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP- 245
C++ E C T L+H S + C+RFP + + + V +P
Sbjct: 69 CLEQETENATCLTKYSTCTTAVFSLSH-----PSDLVACIRFPSDVLNNFANITVQPIPQ 123
Query: 246 FPRLHF 263
P+L F
Sbjct: 124 IPKLRF 129
>Z75529-6|CAA99785.1| 269|Caenorhabditis elegans Hypothetical
protein C44H9.7a protein.
Length = 269
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +3
Query: 69 CIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP- 245
C++ E C T L+H S + C+RFP + + + V +P
Sbjct: 69 CLEQETENATCLTKYSTCTTAVFSLSH-----PSDLVACIRFPSDVLNNFANITVQPIPQ 123
Query: 246 FPRLHF 263
P+L F
Sbjct: 124 IPKLRF 129
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 425 TAEDGCDGEVAAVTRVTRRHHVLSVEHLLRELGDGERAVLS--AATRCERGK 276
T E+ DGE R TRRH L + E GDG+ A + AA E+ K
Sbjct: 218 TIENSGDGETRGKRR-TRRHGKLQPDAPSGEKGDGDAAAATTDAAPAAEKKK 268
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 425 TAEDGCDGEVAAVTRVTRRHHVLSVEHLLRELGDGERAVLS--AATRCERGK 276
T E+ DGE R TRRH L + E GDG+ A + AA E+ K
Sbjct: 218 TIENSGDGETRGKRR-TRRHGKLQPDAPSGEKGDGDAAAATTDAAPAAEKKK 268
>AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein.
Length = 133
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -3
Query: 371 RHHVLSVEHLLRELGDGERAVLS-AATRCERGKSWHKEVETGEGNHVDGKFTKISIKLTG 195
R ++ E + ++ + E L T+ E + W KE+ EG +++IKL
Sbjct: 64 RQMMIKEEEFMSQMKEREEVKLKDLETKLENFEKWRKEIRL-EGAK------ELNIKLHS 116
Query: 194 EPEAGGDARHGEG 156
EPE + H G
Sbjct: 117 EPEVSAELEHEGG 129
>AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical
protein C29F9.2 protein.
Length = 133
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -3
Query: 371 RHHVLSVEHLLRELGDGERAVLS-AATRCERGKSWHKEVETGEGNHVDGKFTKISIKLTG 195
R ++ E + ++ + E L T+ E + W KE+ EG +++IKL
Sbjct: 64 RQMMIKEEEFMSQMKEREEVKLKDLETKLENFEKWRKEIRL-EGAK------ELNIKLHS 116
Query: 194 EPEAGGDARHGEG 156
EPE + H G
Sbjct: 117 EPEVSAELEHEGG 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,973,082
Number of Sequences: 27780
Number of extensions: 224332
Number of successful extensions: 739
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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