Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E04
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 283 5e-77
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 283 7e-77
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 282 1e-76
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 281 2e-76
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 281 2e-76
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 279 6e-76
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 279 1e-75
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 275 1e-74
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 275 1e-74
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 168 2e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 165 2e-41
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 165 2e-41
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 159 1e-39
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 159 1e-39
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 159 1e-39
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 159 1e-39
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 109 1e-24
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 109 2e-24
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 38 0.006
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 38 0.006
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 33 0.12
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 31 0.64
At5g23250.1 68418.m02720 succinyl-CoA ligase [GDP-forming] alpha... 28 3.4
At1g26890.1 68414.m03279 hypothetical protein 28 4.5
At5g26960.1 68418.m03217 kelch repeat-containing F-box family pr... 27 7.9
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 7.9
At2g45490.1 68415.m05658 protein kinase, putative contains prote... 27 7.9
At1g13280.1 68414.m01542 allene oxide cyclase family protein sim... 27 7.9
At1g11600.1 68414.m01332 cytochrome P450, putative similar to cy... 27 7.9
At1g06490.1 68414.m00688 glycosyl transferase family 48 protein ... 27 7.9
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 283 bits (694), Expect = 5e-77
Identities = 128/155 (82%), Positives = 143/155 (92%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DA N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 469 QNKNSSYFVEWIPNNVKTAVCDI 537
QNKNSSYFVEWIPNNVK+ VCDI
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDI 356
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 283 bits (693), Expect = 7e-77
Identities = 129/155 (83%), Positives = 142/155 (91%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QYR LTVPELTQQM+DA N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFVEWIPNNVK+ VCDI
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSTVCDI 356
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 282 bits (691), Expect = 1e-76
Identities = 127/155 (81%), Positives = 143/155 (92%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+D+ N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 469 QNKNSSYFVEWIPNNVKTAVCDI 537
QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDI 356
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 281 bits (690), Expect = 2e-76
Identities = 127/155 (81%), Positives = 143/155 (92%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QYR+LTVPELTQQM+D+ N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFVEWIPNNVK+ VCDI
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSTVCDI 356
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 281 bits (690), Expect = 2e-76
Identities = 127/155 (81%), Positives = 143/155 (92%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QYR+LTVPELTQQM+D+ N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFVEWIPNNVK+ VCDI
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSTVCDI 356
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 279 bits (685), Expect = 6e-76
Identities = 126/155 (81%), Positives = 141/155 (90%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QY AL+VPELTQQM+DA N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+
Sbjct: 299 MMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNV 333
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 469 QNKNSSYFVEWIPNNVKTAVCDI 537
QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDI 356
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 279 bits (683), Expect = 1e-75
Identities = 126/155 (81%), Positives = 141/155 (90%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTC 238
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QY AL+VPELTQQM+DA N
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKN 298
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG++S KEVDEQM+NI
Sbjct: 299 MMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNI 333
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 469 QNKNSSYFVEWIPNNVKTAVCDI 537
QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDI 356
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 275 bits (674), Expect = 1e-74
Identities = 126/155 (81%), Positives = 141/155 (90%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 239
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QY +LTVPELTQQM+DA N
Sbjct: 240 SLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN 299
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +A+FRG+MS KEVDEQ+LN+
Sbjct: 300 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNV 334
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 332 LNVQNKNSSYFVEWIPNNVKSSVCDI 357
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 275 bits (674), Expect = 1e-74
Identities = 127/155 (81%), Positives = 141/155 (90%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 239
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGS+QY +LTVPELTQQM+D+ N
Sbjct: 240 SLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKN 299
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNI 467
MM A DPRHGRYLT +AIFRG+MS KEVDEQ+LNI
Sbjct: 300 MMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNI 334
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 460 LTSQNKNSSYFVEWIPNNVKTAVCDI 537
L QNKNSSYFVEWIPNNVK++VCDI
Sbjct: 332 LNIQNKNSSYFVEWIPNNVKSSVCDI 357
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 168 bits (409), Expect = 2e-42
Identities = 71/161 (44%), Positives = 106/161 (65%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S T+S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTT 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G +N D+ + N+VP+PR+HF + +AP+ S + +VPE+T +F+ N
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSN 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
MMA CDPRHG+Y+ ++RG + K+V+ + I + +
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTI 341
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 165 bits (400), Expect = 2e-41
Identities = 71/161 (44%), Positives = 106/161 (65%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G +N D+ + N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
MMA CDPRHG+Y+ ++RG + K+V+ + I + V
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTV 341
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 165 bits (400), Expect = 2e-41
Identities = 71/161 (44%), Positives = 106/161 (65%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G +N D+ + N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
MMA CDPRHG+Y+ ++RG + K+V+ + I + V
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTV 341
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 159 bits (386), Expect = 1e-39
Identities = 69/149 (46%), Positives = 100/149 (67%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVD 449
MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 159 bits (386), Expect = 1e-39
Identities = 69/149 (46%), Positives = 100/149 (67%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVD 449
MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 159 bits (386), Expect = 1e-39
Identities = 69/149 (46%), Positives = 100/149 (67%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVD 449
MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 159 bits (386), Expect = 1e-39
Identities = 69/149 (46%), Positives = 100/149 (67%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXN 362
LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS 300
Query: 363 MMAACDPRHGRYLTVAAIFRGRMSXKEVD 449
MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 109 bits (262), Expect = 1e-24
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VV+PYN+ L++ +L N D +DN AL I L L+ PT+ N LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTT 241
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAX 359
LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTK 301
Query: 360 NMMAACDPRH-----GRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
N+M + R+ +Y+++ I +G + +V E + I +++LV
Sbjct: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLV 348
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 109 bits (261), Expect = 2e-24
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 182
VV+PYN+ L++ +L N D +DN AL I L L+ PT+ N LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTT 241
Query: 183 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAX 359
LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTK 301
Query: 360 NMMAACDPRH-----GRYLTVAAIFRGRMSXKEVDEQMLNIPKQELV 485
N+M + R+ +Y+++ I +G + +V E + I +++LV
Sbjct: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLV 348
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 37.5 bits (83), Expect = 0.006
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 30 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPG-QL 206
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 819 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIST 878
Query: 207 N---ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTV 326
N DL + + VP+ +FF LT +G R+ + +++
Sbjct: 879 NIKYLDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELKCVSL 919
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 37.5 bits (83), Expect = 0.006
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 30 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPG-QL 206
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 780 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIST 839
Query: 207 N---ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTV 326
N DL + + VP+ +FF LT +G R+ + +++
Sbjct: 840 NIKYLDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELKCVSL 880
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 81 EALYDICFRT-LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 257
+A+ ICF +L P YG ++H+VSL V+ +L+ LA +P P+
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS----LQTELSYLQAHLATLELPQPQ- 127
Query: 258 HFFMPGFAPLTSRGSRQYRALT-VPELTQQMFDAXNM 365
P P++S GS Q ++T +P ++ ++D ++
Sbjct: 128 ----PPQVPVSSSGSLQALSITDLPTISPSVYDLSSI 160
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 3 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 125
++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 80 LIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At5g23250.1 68418.m02720 succinyl-CoA ligase [GDP-forming]
alpha-chain, mitochondrial, putative / succinyl-CoA
synthetase, alpha chain, putative / SCS-alpha, putative
similar to SP|P36967 Succinyl-CoA ligase [GDP-forming]
alpha-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, alpha chain) (SCS-alpha)
{Dictyostelium discoideum}; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 341
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 529 TRQSSRCLGSIPRSTTSSCFGMLSICSSTSXIDIR 425
+RQ +R LGS+ R + C G +CS TS + R
Sbjct: 2 SRQVTRLLGSL-RHSGGGCSGSSKVCSLTSLVQSR 35
>At1g26890.1 68414.m03279 hypothetical protein
Length = 280
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 108 TLKLSTPTYGDLNHLVSLTMSG-VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 263
TL L Y D LVSL S V CL+ + +L K V + +LH+
Sbjct: 110 TLSLRFVVYKDEESLVSLLSSSPVLNCLKVDRHKDDNLTKFTVKVSTLKQLHY 162
>At5g26960.1 68418.m03217 kelch repeat-containing F-box family
protein predicted proteins, Arabidopsis thaliana and
Oryza sativa; contains Pfam profiles PF01344: Kelch
motif, PF00646: F-box domain
Length = 413
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/89 (24%), Positives = 33/89 (37%)
Frame = -1
Query: 484 TSSCFGMLSICSSTSXIDIRPRKMAATVR*RP*RGSHAAIMFXASNICCVSSGTVSARYC 305
TS + SS D+ R+ + R P G A + ++S V +
Sbjct: 252 TSRAVAARAYASSMDLFDVESRQWLRS-RSVPGGGCVVAACAAVGYVYVLTSHAVELSFW 310
Query: 304 LLPRDVRGANPGIKKWRRGKGTMLTASLR 218
RG N G +W+R K L A +R
Sbjct: 311 RFDARRRGGNSGFGEWQRLKSPPLPAQVR 339
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 129 TYGDLNHLVSLTMSGVTTCLRFPGQLN-ADLRKLAVN 236
T G+LN L L MSG +FP +N L L +N
Sbjct: 674 TIGNLNKLTYLNMSGCHNLEKFPADVNLKSLSDLVLN 710
>At2g45490.1 68415.m05658 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to protein kinase
p46XlEg22 [Xenopus laevis] gi|609280|emb|CAA78914
Length = 288
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 39 QLVENTDETYCIDNEALYDICFRTLKLSTP 128
++VEN D Y +DN L +C+ L + P
Sbjct: 187 EMVENRDHDYAVDNWTLGILCYEFLYGNPP 216
>At1g13280.1 68414.m01542 allene oxide cyclase family protein
similar to ERD12 [GI:15320414], allene oxide cyclase
GI:8977961 from [Lycopersicon esculentum]; contains Pfam
profile PF06351: Allene oxide cyclase
Length = 254
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 532 RTRQSSRCLGSIPRSTTSSCFGML-SICSSTSXIDIRPRKM 413
R +S L + RSTTSS G +ICSS+S RP K+
Sbjct: 41 RISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKI 81
>At1g11600.1 68414.m01332 cytochrome P450, putative similar to
cytochrome P450 77A2 (CYPLXXVIIA2) (P-450EG5) [Solanum
melongena] and cytochrome P450 77A3 (SP:O48928) [Glycine
max]; is a member of the PF|00067 Cytochrome P450
family. ESTs gb|Z30775 and gb|Z30776 come from this gene
Length = 510
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +3
Query: 159 LTMSGVTTCLRFPGQLNADLRKLAVN------MVPFPRLHFFMPGFAPLTSRGSRQYRAL 320
LT+ + CL F +++ + K N ++ P L F+P F PL R R+ R L
Sbjct: 184 LTICSILICLCFGAKISEEKIKNIENVLKDVMLITSPTLPDFLPVFTPLFRRQVREAREL 243
Query: 321 TVPEL 335
+L
Sbjct: 244 RKTQL 248
>At1g06490.1 68414.m00688 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1933
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 144 NHLVSLTMSGVTTCLRFPGQLNADLRKLAV--NMVPFPRLHFFMPGFAPLTSRGSRQYRA 317
+ LV +++ + LR ++ D ++A F + H P + RG RQ++
Sbjct: 48 SELVPSSLASIAPILRVANDIDQDNARVAYLCRFHAFEKAHRMDP---TSSGRGVRQFKT 104
Query: 318 LTVPELTQQMFDAXNMMAACDPR 386
+ +L ++ +M+A DPR
Sbjct: 105 YLLHKLEEEEEITEHMLAKSDPR 127
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,414,821
Number of Sequences: 28952
Number of extensions: 214995
Number of successful extensions: 648
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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