Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E03
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0810 - 31934965-31935013,31935096-31935217,31935328-319355... 45 3e-05
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 42 3e-04
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 31 0.60
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 30 1.0
09_06_0262 - 21921647-21922796,21922897-21923423 29 1.4
08_01_0233 + 1876940-1877509,1907940-1908195,1908290-1908589,190... 29 1.8
12_02_0982 - 25031778-25032122,25032388-25032534,25032693-250337... 29 2.4
12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781 28 3.2
03_06_0497 - 34332310-34334415 28 4.2
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 28 4.2
03_02_0349 - 7722461-7723069,7723494-7724221,7724281-7724641,772... 27 5.6
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 27 5.6
01_06_0924 - 33058194-33058697,33058798-33060147,33060234-330603... 27 5.6
12_02_0349 - 17820352-17821238,17822976-17823363 27 7.3
04_01_0261 + 3516461-3516629,3517729-3517823,3518724-3518834,351... 27 7.3
03_05_1023 - 29775603-29775725,29776763-29776813,29776902-29777042 27 7.3
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 27 7.3
06_03_0752 - 24171847-24174321 27 9.7
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 27 9.7
>02_05_0810 -
31934965-31935013,31935096-31935217,31935328-31935519,
31937689-31937759,31938708-31938819,31938911-31939015
Length = 216
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 277 NGSLNMTDNSLG-GGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPP 453
+G ++ D + GGD+ A++ +L +K R++EMEEEA L+ MQ +V K+M G PP
Sbjct: 16 DGDMDGADVDMASGGDD--AAKLQELDQMKRRLKEMEEEAAALRDMQAKVAKEM-QGGPP 72
Query: 454 G 456
G
Sbjct: 73 G 73
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 253 DNNHLDGTNGSLNMTDNSLGG-GDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDK 429
+ + + G L+ D +G GDE A++ +L +K R++EMEEEA L++MQT+V K
Sbjct: 4 EEHEVYGQEIPLDGEDVDMGAPGDE--AAKMQELDEMKRRLKEMEEEANALREMQTKVAK 61
Query: 430 QM 435
+M
Sbjct: 62 EM 63
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 30.7 bits (66), Expect = 0.60
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 346 DLAAIKARVREMEEEAEKLKQMQTEVDKQMS 438
D+ I+A++ E++E EKLK E+DK +S
Sbjct: 252 DVKQIRAKIVELDESTEKLKSEIQEMDKNIS 282
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 223 AENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEM 327
A D+ D + +H DG +GSL + D++ GD++
Sbjct: 693 AAADEAADKLSADHFDGNDGSLALVDSAEVDGDDV 727
>09_06_0262 - 21921647-21922796,21922897-21923423
Length = 558
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 226 ENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDE-----MTGAEVPDLAAIKARVREMEEE 390
+ DDY D +D+N +D S ++ + + D+ A +L I R R + EE
Sbjct: 19 DGDDYTDEVDSN-VDDDGESWDLEEEEVDDDDDDEAKKKKAAAAVNLTKIDRRYRNLSEE 77
Query: 391 AEKLKQMQTEVDKQMSMGSPPG 456
+ +Q + PPG
Sbjct: 78 QVRARQDADTANVGELFAIPPG 99
>08_01_0233 +
1876940-1877509,1907940-1908195,1908290-1908589,
1908777-1908939,1908958-1908994,1910122-1910742
Length = 648
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 310 GGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVD 426
GGGD T E AAI R+RE+ E + ++ +T VD
Sbjct: 210 GGGDAATATEPSLPAAITRRLRELAWEDKDKEKARTVVD 248
>12_02_0982 -
25031778-25032122,25032388-25032534,25032693-25033718,
25033758-25034227,25034393-25034471
Length = 688
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 226 ENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEE 390
++DD D D+ D + + D GGG+E+ GA+ DL + RE +++
Sbjct: 192 DDDDDDDDDDDEDDDDDDDDDDDDDGDGGGGNEVVGADGHDLGVVVHPWREDDDD 246
>12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781
Length = 609
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 244 DSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAI 360
D + + G GS + D GGGDE+ GA+ DL I
Sbjct: 116 DGVQFVGVQGGVGSDDDDDGDGGGGDEVVGADGDDLGVI 154
>03_06_0497 - 34332310-34334415
Length = 701
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 184 QVPNSCFRQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSLGG-GDEMTGAEVPDLAAI 360
Q+ N ++ A +D++ D ID+NH+ + SL ++S G D TG ++ + I
Sbjct: 146 QIKNKIVAVELDTARDDEFAD-IDDNHVGIDDNSLKSVNSSPAGYHDAATGGKLASVNLI 204
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 358 IKARVREMEEEAEKLKQMQTEVDKQ 432
++ R+RE++EE E+LK+ Q ++DKQ
Sbjct: 192 LEERLRELDEEKEELKKYQ-QLDKQ 215
>03_02_0349 -
7722461-7723069,7723494-7724221,7724281-7724641,
7724751-7725072,7725183-7725661,7726157-7726430,
7726598-7726884,7726966-7727388,7727545-7727890,
7728011-7728328,7729817-7731081
Length = 1803
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 205 RQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAE 339
R E A D LDS D + LD +NM ++L G + G E
Sbjct: 303 RAAEEGAHPADLLDSTDKDMLDAKYWEINMYKSALEGRKDEIGVE 347
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = +1
Query: 262 HLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVD 426
+L G+ ++ ++ GG GAEV + K +++++ + + L ++ EV+
Sbjct: 371 NLTGSQPGTPLSGGTMTGGSASQGAEVTNQLLGKRKIQDLVSQVDPLGKVDPEVE 425
>01_06_0924 -
33058194-33058697,33058798-33060147,33060234-33060303,
33060918-33060976
Length = 660
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 319 DEMTGAEVPDLAA--IKARVREMEEEAEKLKQ 408
DE G E+P A +KARV E+E+E +KQ
Sbjct: 594 DEGKGKELPAEAITDVKARVSELEKECMSMKQ 625
>12_02_0349 - 17820352-17821238,17822976-17823363
Length = 424
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 310 GGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEV 423
GGG +T A VP + + E EEE E+ ++ + V
Sbjct: 347 GGGRRLTDAPVPVVTEVVEEEEEEEEEEEEEEEEEVAV 384
>04_01_0261 +
3516461-3516629,3517729-3517823,3518724-3518834,
3519179-3519213,3519864-3519954,3520124-3520196,
3521127-3521257,3524325-3524720
Length = 366
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 319 DEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPG 456
+ +T DLA +K +ME+E L++ E+++Q+ S G
Sbjct: 198 ENLTKKRNEDLAKLKKEKEDMEKEIRGLRERIKELEEQVISSSSSG 243
>03_05_1023 - 29775603-29775725,29776763-29776813,29776902-29777042
Length = 104
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 205 RQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREME 384
RQ+ + +DD D L ++ + ++G G + +K R+ E
Sbjct: 15 RQVASLLADDDPCDDSTPRRLSTFVNAVAL--GNVGAGKMAVLNSLIGHPMLKEAARKNE 72
Query: 385 EEAEKLKQMQTEV 423
EE EKL+Q +E+
Sbjct: 73 EETEKLRQQGSEI 85
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/25 (44%), Positives = 21/25 (84%)
Frame = +1
Query: 358 IKARVREMEEEAEKLKQMQTEVDKQ 432
++ R+RE++EE E++K+ Q ++DKQ
Sbjct: 91 LEERLRELDEEKEEMKKYQ-QLDKQ 114
>06_03_0752 - 24171847-24174321
Length = 824
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 253 DNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEE 390
DNNHL NG+ N N+ GGG A + I+ R+ +E +
Sbjct: 473 DNNHLGNGNGNGN---NAGGGGGGSPPARDARVGKIRIRLSTLETD 515
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 307 DCCQSCSRNRLFRPSDCCQSNLNNHHF 227
DC Q C R P CC+S H F
Sbjct: 128 DCLQGCRRLLEVHPLTCCESRNMMHGF 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,736,603
Number of Sequences: 37544
Number of extensions: 188135
Number of successful extensions: 636
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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