Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E03
         (462 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical pr...    36   0.014
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF040653-5|AAB95026.1|  491|Caenorhabditis elegans F-box b prote...    29   2.1  
AF038620-1|AAB93487.1|  256|Caenorhabditis elegans Hypothetical ...    28   2.8  
EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.     28   3.7  
CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical ...    28   3.7  
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (...    27   6.5  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    27   6.5  
AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical...    27   6.5  

>Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical
           protein C17E4.5 protein.
          Length = 205

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 18/53 (33%), Positives = 35/53 (66%)
 Frame = +1

Query: 289 NMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGS 447
           ++ D+ +   ++MTG +  DL+AI+  + E+EEE +KLK +Q E+   M++ +
Sbjct: 5   DIIDDDVLNIEDMTGDDA-DLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNT 56


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = +1

Query: 70  LEYINTDLFKCLI*N-LFFKWVIGIITGLV 156
           L+Y+N D+F+C I + +FF +VI ++T  +
Sbjct: 148 LKYLNDDIFECFIISFVFFNFVISVLTPFI 177


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 11/36 (30%), Positives = 25/36 (69%)
 Frame = -3

Query: 280  RLFRPSDCCQSNLNNHHFLPFPLFVENMNSALGYKH 173
            ++ +PSD   S+ + HH++P P+F +++ + + Y+H
Sbjct: 1558 QIAKPSDVKLSDYDKHHYVP-PVFEKSVVNQVEYEH 1592


>Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical
           protein ZK632.2 protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 20/90 (22%), Positives = 41/90 (45%)
 Frame = +1

Query: 193 NSCFRQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARV 372
           N+  R   +  E +DY D  D+ +LD T       +      +E  G +  +    ++  
Sbjct: 358 NTKLRMQRKTLEANDYYDEDDDLYLDRTGQLEKQREKRKQWAEEGFGHKRTETDTYESLC 417

Query: 373 REMEEEAEKLKQMQTEVDKQMSMGSPPGLT 462
           R++EE  +++ + Q  +D ++S G+    T
Sbjct: 418 RKLEESKKEIIECQKHLD-ELSAGTKKSRT 446


>AF040653-5|AAB95026.1|  491|Caenorhabditis elegans F-box b protein
           protein 52 protein.
          Length = 491

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 202 FRQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNS 306
           FRQI++M  ++ YL ++  N+L  T  S+  T+NS
Sbjct: 189 FRQILQMEHHNLYLSNLSLNNLLITRSSVIETENS 223


>AF038620-1|AAB93487.1|  256|Caenorhabditis elegans Hypothetical
           protein H10D12.2 protein.
          Length = 256

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 199 CFRQIVEMAEN--DDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEV 342
           C RQ  +  +   ++  + + N    G++G ++ T+N  G  +E+ GAEV
Sbjct: 7   CERQPAQDGQKMENEVCEGVANTSEGGSDGKISETENETGDLEEIPGAEV 56


>EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.
          Length = 973

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +1

Query: 217  EMAENDDYLDSI--DNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKA-RVREMEE 387
            E+AE+++Y D    D   L+G+ GS  + D+     +E+ G+E  + A+  A R  ++E 
Sbjct: 882  ELAEDEEYWDEEYWDEEELEGSEGSQEIFDDFPDVVEELEGSEGSEEASEAAPRAPQLEH 941

Query: 388  EA 393
             A
Sbjct: 942  LA 943


>CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical
            protein T06A10.1 protein.
          Length = 973

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +1

Query: 217  EMAENDDYLDSI--DNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKA-RVREMEE 387
            E+AE+++Y D    D   L+G+ GS  + D+     +E+ G+E  + A+  A R  ++E 
Sbjct: 882  ELAEDEEYWDEEYWDEEELEGSEGSQEIFDDFPDVVEELEGSEGSEEASEAAPRAPQLEH 941

Query: 388  EA 393
             A
Sbjct: 942  LA 943


>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
           (drosophila peroxidase)homolog protein 1 protein.
          Length = 1285

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +1

Query: 148 GLVTEC*CSVYNQVPNSCFRQIVEMAENDDYLDSIDNNHLDGTN--GSLNMTDNSLGGGD 321
           GLV +C  S   ++P +  R +  +   ++ +  +  + L+G N   +L +T N +   +
Sbjct: 33  GLVVDCSSSGLTRIPKNISRNVRSLVIRNNRIHKLKRSDLEGFNQLETLVLTHNKIKIIE 92

Query: 322 EMTGAEVPDLAAIKARVREM 381
           E     +P+L  +     E+
Sbjct: 93  ENVLDHLPELKRLSLAHNEL 112


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
           protein F59E12.9 protein.
          Length = 1621

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 346 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPP 453
           D  AIK + +E E+EAE+ K+   + +K+++  S P
Sbjct: 422 DPEAIKKKEKEKEKEAEREKEKAKDREKKIAALSKP 457


>AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical
           protein H20J04.1 protein.
          Length = 843

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
 Frame = +1

Query: 196 SCFRQIVEMAE----NDDYLDSIDNNHLD-----GTNGSLNMTDNSLGGGDEMTGAEVPD 348
           S  R+IVE A+    ++  + + +N ++D     G   SL        G DE T A    
Sbjct: 402 STVRRIVEYAKLINTSNPQVTNFENGYIDILNALGNLSSLKSAVKEYRGSDEFTNAASSS 461

Query: 349 LAAIKARVREMEE 387
           ++   +RVR M++
Sbjct: 462 VSGYHSRVRSMDK 474


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,586,076
Number of Sequences: 27780
Number of extensions: 177988
Number of successful extensions: 645
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)