Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_E02
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 81 5e-16
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 81 5e-16
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 76 2e-14
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 76 2e-14
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 73 2e-13
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 73 2e-13
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 64 8e-11
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 64 8e-11
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 60 2e-09
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 60 2e-09
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 60 2e-09
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 60 2e-09
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 60 2e-09
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 60 2e-09
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 28 4.8
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 28 4.8
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 28 6.3
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 28 6.3
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 27 8.4
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 27 8.4
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 27 8.4
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 27 8.4
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 81.4 bits (192), Expect = 5e-16
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Frame = +2
Query: 23 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSE 199
TS + V SP+ +++ + L GA +R +I + NG + S ++K +
Sbjct: 24 TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNS 83
Query: 200 MNPDYFTM-ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKT 373
D T+ AN+++V + + + FT +R+ Y +E TIDF +++AA I+NQ+ +E T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 374 RGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSL 553
+G I I D + + A L N IFFQG W F E E +F + +T P +
Sbjct: 144 KGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKF--GEPAESNFSISATENRLVPMLRE 200
Query: 554 LQPLFYTR 577
+ FY +
Sbjct: 201 TRDYFYNK 208
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 81.4 bits (192), Expect = 5e-16
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Frame = +2
Query: 23 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSE 199
TS + V SP+ +++ + L GA +R +I + NG + S ++K +
Sbjct: 24 TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNS 83
Query: 200 MNPDYFTM-ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKT 373
D T+ AN+++V + + + FT +R+ Y +E TIDF +++AA I+NQ+ +E T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 374 RGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSL 553
+G I I D + + A L N IFFQG W F E E +F + +T P +
Sbjct: 144 KGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKF--GEPAESNFSISATENRLVPMLRE 200
Query: 554 LQPLFYTR 577
+ FY +
Sbjct: 201 TRDYFYNK 208
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +2
Query: 8 LKETYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSK 187
LK T +VV SPL + + + L AGA ++ E++ LG S + + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLME 69
Query: 188 TFSEMNPDYFT-MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWA 361
+ + T + N+++V YT+ + + TV + Y++ E++DFS T++AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 362 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
T G IK I D+ + NA A L N ++F+ W F T ++F
Sbjct: 130 ENHTNGKIKDLIPADSAN-NAFAFLVNAMYFKADWQSKFAKESTTGREF 177
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +2
Query: 8 LKETYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSK 187
LK T +VV SPL + + + L AGA ++ E++ LG S + + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLME 69
Query: 188 TFSEMNPDYFT-MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWA 361
+ + T + N+++V YT+ + + TV + Y++ E++DFS T++AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 362 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
T G IK I D+ + NA A L N ++F+ W F T ++F
Sbjct: 130 ENHTNGKIKDLIPADSAN-NAFAFLVNAMYFKADWQSKFAKESTTGREF 177
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 72.5 bits (170), Expect = 2e-13
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
++ V SPL + + L L++ A GE +R EI K L NG + IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGE-TRDEIRKALLNGATDEELEQHFSNISAGLLVAEKG 90
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN I+ +T+ + + V++ Y + ++F D + +A+ IN + +E T+GH
Sbjct: 91 TEV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I+ D+I A L N +F+ +W F T +++F
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 72.5 bits (170), Expect = 2e-13
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
++ V SPL + + L L++ A GE +R EI K L NG + IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGE-TRDEIRKALLNGATDEELEQHFSNISAGLLVAEKG 90
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN I+ +T+ + + V++ Y + ++F D + +A+ IN + +E T+GH
Sbjct: 91 TEV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I+ D+I A L N +F+ +W F T +++F
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 64.1 bits (149), Expect = 8e-11
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +2
Query: 35 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPD 211
++++V SPL + +++ L G SR +I L +G + S +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 212 YFT-MANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 385
+ANK+Y+ +T++ F T ++ Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 386 KSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
K+ + D+I +A A L N I+F+ W F+ E+DF
Sbjct: 140 KNIATQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDF 179
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 64.1 bits (149), Expect = 8e-11
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Frame = +2
Query: 35 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPD 211
++++V SPL + +++ L G SR +I L +G + S +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 212 YFT-MANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 385
+ANK+Y+ +T++ F T ++ Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 386 KSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
K+ + D+I +A A L N I+F+ W F+ E+DF
Sbjct: 140 KNIATQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDF 179
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 38 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 205
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 206 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 382
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 383 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 508
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 423 QLPRSSMLYSSRVTGT----CLSTQVKLKRKISMLTLQ 524
QL +S Y + VT T CL T ++LKR+ S LQ
Sbjct: 243 QLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQ 280
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 423 QLPRSSMLYSSRVTGT----CLSTQVKLKRKISMLTLQ 524
QL +S Y + VT T CL T ++LKR+ S LQ
Sbjct: 243 QLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQ 280
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -3
Query: 549 LMVGFFTMVVESTWKSFSLVS-----LALKGTCQ*--PWKNITLKSAAAAFGSMVSSEIG 391
++ G + +V+ + W+ F L L G + P KN+T+ A +G + +E+
Sbjct: 13 VIFGVYAVVILTFWQFFYSADFLSKFLQLSGPSEFSVPRKNVTIYVATTYYGDPIDAEMA 72
Query: 390 DLICPRV 370
L CP +
Sbjct: 73 FLTCPEL 79
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -3
Query: 549 LMVGFFTMVVESTWKSFSLVS-----LALKGTCQ*--PWKNITLKSAAAAFGSMVSSEIG 391
++ G + +V+ + W+ F L L G + P KN+T+ A +G + +E+
Sbjct: 13 VIFGVYAVVILTFWQFFYSADFLSKFLQLSGPSEFSVPRKNVTIYVATTYYGDPIDAEMA 72
Query: 390 DLICPRV 370
L CP +
Sbjct: 73 FLTCPEL 79
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 179 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 316
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 179 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 316
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 179 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 316
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 179 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 316
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,785,959
Number of Sequences: 27780
Number of extensions: 317854
Number of successful extensions: 980
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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