Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E01
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19591-1|CAA79639.1|  153|Drosophila melanogaster Cu-Zn superoxi...   144   3e-35
Y00367-1|CAA68443.1|  153|Drosophila melanogaster protein ( Dros...   144   3e-35
X17332-1|CAA35210.1|  153|Drosophila melanogaster Cu-Zn superoxi...   144   3e-35
X13780-1|CAA32028.1|  153|Drosophila melanogaster Cu-Zn superoxi...   144   3e-35
M24421-1|AAA28906.1|  153|Drosophila melanogaster Cu/Zn-superoxi...   144   3e-35
AY071435-1|AAL49057.1|  153|Drosophila melanogaster RE52090p pro...   144   3e-35
AE014296-1904|AAF50095.1|  153|Drosophila melanogaster CG11793-P...   144   3e-35
S72589-1|AAD14963.2|  146|Drosophila melanogaster slow superoxid...   134   3e-32
BT015997-1|AAV36882.1|  250|Drosophila melanogaster RE42883p pro...   107   5e-24
BT003225-1|AAO24980.1|  181|Drosophila melanogaster LP09315p pro...   107   5e-24
AY060339-1|AAL25378.1|  188|Drosophila melanogaster GH23708p pro...   107   5e-24
AE013599-1300|AAG22285.1|  181|Drosophila melanogaster CG9027-PB...   107   5e-24
AE013599-1299|AAF58647.3|  181|Drosophila melanogaster CG9027-PA...   107   5e-24
AE013599-1298|AAM68736.1|  188|Drosophila melanogaster CG9027-PC...   107   5e-24
AE013599-1297|ABI31086.1|  217|Drosophila melanogaster CG9027-PD...   107   5e-24
AY026866-1|AAK07691.1|  264|Drosophila melanogaster Cu-chaperone...    84   6e-17
AE013599-1034|AAF58838.1|  264|Drosophila melanogaster CG17753-P...    84   6e-17
BT023314-1|AAY55730.1|  171|Drosophila melanogaster IP10146p pro...    50   1e-06
AE014297-3873|AAF56526.1|  270|Drosophila melanogaster CG5948-PA...    50   1e-06
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   3.0  
BT003648-1|AAO39652.1|  938|Drosophila melanogaster AT11044p pro...    27   6.8  
AE014298-3177|AAN09566.1|  938|Drosophila melanogaster CG14619-P...    27   6.8  
AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown prot...    27   9.0  
AE014298-3101|AAN09669.1|  262|Drosophila melanogaster CG32523-P...    27   9.0  
AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA...    27   9.0  

>Z19591-1|CAA79639.1|  153|Drosophila melanogaster Cu-Zn superoxide
           dismutase protein.
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>Y00367-1|CAA68443.1|  153|Drosophila melanogaster protein (
           Drosophila mRNA forCu-Zn superoxide dismutase. ).
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>X17332-1|CAA35210.1|  153|Drosophila melanogaster Cu-Zn superoxide
           dismutase protein.
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>X13780-1|CAA32028.1|  153|Drosophila melanogaster Cu-Zn superoxide
           dismutase protein.
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>M24421-1|AAA28906.1|  153|Drosophila melanogaster Cu/Zn-superoxide
           dismutase protein.
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>AY071435-1|AAL49057.1|  153|Drosophila melanogaster RE52090p
           protein.
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>AE014296-1904|AAF50095.1|  153|Drosophila melanogaster CG11793-PA
           protein.
          Length = 153

 Score =  144 bits (350), Expect = 3e-35
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 116 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAG 295
           M  KAVCV++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G
Sbjct: 1   MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60

Query: 296 AHFNPLKQEHGAPDSDTRHIGDLGNIEASSD 388
            HFNP  +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  PHFNPYGKEHGAPVDENRHLGDLGNIEATGD 91


>S72589-1|AAD14963.2|  146|Drosophila melanogaster slow superoxide
           dismutase protein.
          Length = 146

 Score =  134 bits (325), Expect = 3e-32
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = +2

Query: 137 VLHGDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLK 316
           V++GD  GTVFF+Q+   +PV VSGEV GL+KG HGFHVHEFGDNTNGC S+G HFNP  
Sbjct: 1   VINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYG 60

Query: 317 QEHGAPDSDTRHIGDLGNIEASSD 388
           +EHGAP  + RH+GDLGNIEA+ D
Sbjct: 61  KEHGAPVDENRHLGDLGNIEATGD 84


>BT015997-1|AAV36882.1|  250|Drosophila melanogaster RE42883p
           protein.
          Length = 250

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 57  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 116

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 117 NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 155


>BT003225-1|AAO24980.1|  181|Drosophila melanogaster LP09315p
           protein.
          Length = 181

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 24  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 83

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 84  NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 122


>AY060339-1|AAL25378.1|  188|Drosophila melanogaster GH23708p
           protein.
          Length = 188

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 31  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 90

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 91  NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 129


>AE013599-1300|AAG22285.1|  181|Drosophila melanogaster CG9027-PB,
           isoform B protein.
          Length = 181

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 24  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 83

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 84  NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 122


>AE013599-1299|AAF58647.3|  181|Drosophila melanogaster CG9027-PA,
           isoform A protein.
          Length = 181

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 24  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 83

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 84  NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 122


>AE013599-1298|AAM68736.1|  188|Drosophila melanogaster CG9027-PC,
           isoform C protein.
          Length = 188

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 31  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 90

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 91  NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 129


>AE013599-1297|ABI31086.1|  217|Drosophila melanogaster CG9027-PD,
           isoform D protein.
          Length = 217

 Score =  107 bits (257), Expect = 5e-24
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
 Frame = +2

Query: 116 MPAKAVCVLHG-------DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 274
           MP +A+  L G        V G V F Q D    V V  +++GL +GKHGFH+HE GD T
Sbjct: 24  MPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLT 83

Query: 275 NGCTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDG 391
           NGC S GAH+NP K +HG PD + RH+GDLGN+EA+S G
Sbjct: 84  NGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTG 122


>AY026866-1|AAK07691.1|  264|Drosophila melanogaster Cu-chaperone
           for superoxide dismutaseprotein.
          Length = 264

 Score = 84.2 bits (199), Expect = 6e-17
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 182 DESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHGAP--DSDTRHI 355
           D+   VVV G V GLS G HG H+HE GD + GC+S G H+NP +  HG+P   ++ RH 
Sbjct: 102 DKKPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERHA 161

Query: 356 GDLGNIEASSDG 391
           GDLGNI A  +G
Sbjct: 162 GDLGNIRADENG 173


>AE013599-1034|AAF58838.1|  264|Drosophila melanogaster CG17753-PA
           protein.
          Length = 264

 Score = 84.2 bits (199), Expect = 6e-17
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 182 DESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHGAP--DSDTRHI 355
           D+   VVV G V GLS G HG H+HE GD + GC+S G H+NP +  HG+P   ++ RH 
Sbjct: 102 DKKPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERHA 161

Query: 356 GDLGNIEASSDG 391
           GDLGNI A  +G
Sbjct: 162 GDLGNIRADENG 173


>BT023314-1|AAY55730.1|  171|Drosophila melanogaster IP10146p
           protein.
          Length = 171

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +2

Query: 152 VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHF 304
           V+G + F Q   +S + V+  V GL  GKH  H+H FGD ++GC S G  F
Sbjct: 9   VAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQF 59


>AE014297-3873|AAF56526.1|  270|Drosophila melanogaster CG5948-PA
           protein.
          Length = 270

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +2

Query: 152 VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHF 304
           V+G + F Q   +S + V+  V GL  GKH  H+H FGD ++GC S G  F
Sbjct: 108 VAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQF 158


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 348   RVSESGAPCSCFSGLK*APAEVQPLVLSPNSC 253
             RV  S A CSC SG    P   +P  +S + C
Sbjct: 17230 RVQGSNAQCSCLSGFIGTPPNCRPECVSNSDC 17261


>BT003648-1|AAO39652.1|  938|Drosophila melanogaster AT11044p
           protein.
          Length = 938

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 188 SSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFN 307
           S+PV V+ E+ G   G  G      G  T+  T  GAH N
Sbjct: 444 STPVAVTSELGGPISGDGGETATAMGQPTSKVTVRGAHSN 483


>AE014298-3177|AAN09566.1|  938|Drosophila melanogaster CG14619-PC,
           isoform C protein.
          Length = 938

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 188 SSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFN 307
           S+PV V+ E+ G   G  G      G  T+  T  GAH N
Sbjct: 444 STPVAVTSELGGPISGDGGETATAMGQPTSKVTVRGAHSN 483


>AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown protein.
          Length = 1192

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 105  SSTACLLKLYAFFTEM*VEQFSSTKRM 185
            S+TA LLK+Y    E   +QF S+KR+
Sbjct: 942  STTADLLKMYFKLEEFFTQQFKSSKRV 968


>AE014298-3101|AAN09669.1|  262|Drosophila melanogaster CG32523-PA
           protein.
          Length = 262

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 104 IFYG-MPAKAVCVLHGDVSGTVFFDQKDESSPVVVSGEVKGLS 229
           +FY  +P   +C+LH   SG  +    D   P    G+V GL+
Sbjct: 191 MFYSRLPETMICLLHSKNSGACY---GDSGGPATYGGKVVGLA 230


>AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA
            protein.
          Length = 1876

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 105  SSTACLLKLYAFFTEM*VEQFSSTKRM 185
            S+TA LLK+Y    E   +QF S+KR+
Sbjct: 1328 STTADLLKMYFKLEEFFTQQFKSSKRV 1354


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,938,930
Number of Sequences: 53049
Number of extensions: 335375
Number of successful extensions: 906
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)