Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D14
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        25   0.48 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   3.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   5.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.8  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 287 YISLSKTFSEMNPDYFTMANKIYVGNKY 370
           +IS + +F EM PDY    + + V + Y
Sbjct: 29  FISGTSSFHEMRPDYLLPKDVVVVSSNY 56


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 412 LVLTDSDREFLIQSIFISDVDFIGHSEVIRIHLRE 308
           L+LT+SD +   Q I   DV+   +SEV +   +E
Sbjct: 366 LILTESDTKLSSQGILGEDVE--NNSEVSKSRTKE 398


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 564 YSSRVTGTCLSTQVKLKRKISMLTLQP 644
           Y+  V G  LST++ LKR       QP
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQP 398


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 232 CGDRQVFRQW 261
           CG  Q FR+W
Sbjct: 648 CGQEQAFRKW 657


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,882
Number of Sequences: 438
Number of extensions: 3865
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)