Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D13
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   0.96 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   1.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   3.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.8  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   9.0  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +2

Query: 59  GHVAAMRERFESMTRANTPCPDLVRSSSPTLDVFRITPSPDSLG*KGLNVIYSRTFIISL 238
           G+V +MRE+F           DLVR        +R  P+P      GL +IYS   I+SL
Sbjct: 20  GYVPSMREKFLGWN-VPPEYSDLVRPH------WRAFPAPGKHFHIGLAIIYSMLLIMSL 72


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -3

Query: 207 TLSPFHPKLSGDGV-----IRNTSNVGLEDLTRSGHGVLARVILSNRSLIA 70
           T+  FHP+ + +       +RN   VGL DL +S   V ++++     L+A
Sbjct: 148 TVKNFHPRCAVNNYNDPSNVRNCELVGLHDLDQSQEYVRSKLVDFLNDLVA 198


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +2

Query: 59  GHVAAMRERFESMTRANTPCPDLVRSSSPTLDVFRITPSPDSLG*KGLNVIYSRTFIISL 238
           G+V +MRE+F      N P P+      P    +R  P+P      GL +IYS   I+SL
Sbjct: 20  GYVPSMREKFLGW---NVP-PEYSDLVHPH---WRAFPAPGKHFHIGLAIIYSMLLIMSL 72


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 16  ERAGRNGREGMRDGGSRGR 72
           E  GR    G   GGSRGR
Sbjct: 76  EETGRGKGRGHGKGGSRGR 94


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -3

Query: 165  IRNTSNVGLEDLTRSGHGVLARVILSNRSLIAAT*PAITHPFPSVST 25
            I+ +++ GL+ +  SGH VL     S +S++A++   +T+   +++T
Sbjct: 923  IQVSTSAGLQTIRLSGHSVLH----SAQSVVASSASNVTNVTTNLTT 965


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 327 KTKQPVISLYEIFCEYFYLI 268
           K   P   LY++ C  F+LI
Sbjct: 197 KENMPEFPLYQLSCILFFLI 216


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 183 LSGDGVIRNTSNVGLED 133
           L G GV+ N   +G+ED
Sbjct: 377 LPGIGVVYNGDEIGMED 393


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 89  ESMTRANTPCPDLVRSSSPTLDVFRITPSPDSLG*KGL 202
           +S ++AN+P P    +    L   R++P P      GL
Sbjct: 352 KSGSKANSPFPGSTEADIIELQDLRMSPLPSIRNRSGL 389


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,838
Number of Sequences: 438
Number of extensions: 3518
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)