Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D12
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    31   0.53 
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    31   0.53 
Z36753-12|CAE17919.1|   92|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U80033-4|AAC48198.2|  467|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF040649-2|AAB95004.2|  324|Caenorhabditis elegans Serpentine re...    27   6.5  
Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF078787-10|AAC26956.1|  352|Caenorhabditis elegans Hypothetical...    27   8.6  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +1

Query: 172 GNLAYSVNDLGYKILIQKMQQNKNENIVISPXXXXXXXXXXXXXSVGNTYDELASAL 342
           G L +S  D G  +L    QQN  E+ V SP             + G T DE+  AL
Sbjct: 11  GLLLHSETDFGLSLL---RQQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKAL 64


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +1

Query: 172 GNLAYSVNDLGYKILIQKMQQNKNENIVISPXXXXXXXXXXXXXSVGNTYDELASAL 342
           G L +S  D G  +L    QQN  E+ V SP             + G T DE+  AL
Sbjct: 11  GLLLHSETDFGLSLL---RQQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKAL 64


>Z36753-12|CAE17919.1|   92|Caenorhabditis elegans Hypothetical
           protein T09A5.15 protein.
          Length = 92

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 305 LPRRVNANKPAIPVGEITMFSFLFCCIFCIKILYPKSFTEYAK 177
           LP+    N+P +    +   + + CC      LYPK   +Y K
Sbjct: 19  LPKWAKVNRPTLGSMAVVATALVTCCAVAAVTLYPKYHHDYYK 61


>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -2

Query: 359 TSWEKPRALASSS*VFPTLPRRVNANKPAIPVGEITMFSFL 237
           T W            F  + RR N  KP    G++T +SFL
Sbjct: 659 TDWHVVEVRVEGDDGFEVITRRNNPAKPGAVTGQLTYYSFL 699


>U80033-4|AAC48198.2|  467|Caenorhabditis elegans Hypothetical
           protein T23H2.4 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 350 EKPRALASSS*VFPTLPRRVNANKPAIPVGEITMFS 243
           EKP +LAS   + P  P  V+A    IP+  IT FS
Sbjct: 419 EKPSSLASPVGILPISPTLVSAR--GIPIFPITSFS 452


>AF040649-2|AAB95004.2|  324|Caenorhabditis elegans Serpentine
           receptor, class i protein74 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -2

Query: 218 IKILYPKSFTEYAKFPSFIM 159
           IK +YPK + +++K P+F++
Sbjct: 166 IKEVYPKGYLQFSKLPNFVV 185


>Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical
           protein B0024.6 protein.
          Length = 1161

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 103 LNWSSGNSHETNDEKVTTSIINDGNLAYSVNDLGYKILIQKMQQNKNENIVISP 264
           L W   +SHE +    + + + +      + D G +I     Q NK++ +  SP
Sbjct: 725 LTWIHESSHEFHGMLTSKNCLLNDRWQLKITDFGLRIFRTHDQYNKSDRLWTSP 778


>AF078787-10|AAC26956.1|  352|Caenorhabditis elegans Hypothetical
           protein T17A3.10 protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 103 LNWSSGNSHETNDEKVTTSIINDGNLAYSV 192
           ++W   NS+ T+D  VTT I  DGN  Y V
Sbjct: 164 VSWRLENSNSTSDLSVTTLI--DGNSKYHV 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,443,633
Number of Sequences: 27780
Number of extensions: 175380
Number of successful extensions: 452
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)