Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_D07
(286 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 31 0.12
At5g59460.1 68418.m07452 scarecrow-like transcription factor 11 ... 29 0.38
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 28 1.2
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 27 2.0
At1g14700.1 68414.m01757 purple acid phosphatase, putative conta... 27 2.0
At4g24150.1 68417.m03465 expressed protein ; expression supporte... 26 3.5
At1g32350.1 68414.m03988 alternative oxidase, putative similar t... 26 3.5
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 26 3.5
At3g12420.1 68416.m01547 hypothetical protein 26 4.6
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 26 4.6
At5g07400.1 68418.m00847 forkhead-associated domain-containing p... 25 6.1
At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transfera... 25 6.1
At2g15520.1 68415.m01776 zinc finger protein, putative strong si... 25 6.1
At1g58440.1 68414.m06648 squalene monooxygenase, putative / squa... 25 6.1
At5g21080.1 68418.m02510 expressed protein predicted proteins - ... 25 8.1
At4g22740.2 68417.m03281 glycine-rich protein 25 8.1
At4g22740.1 68417.m03280 glycine-rich protein 25 8.1
At4g14970.1 68417.m02301 hypothetical protein 25 8.1
At4g11850.1 68417.m01886 phospholipase D gamma 1 / PLD gamma 1 (... 25 8.1
At4g11840.1 68417.m01885 phospholipase D gamma 3 / PLD gamma 3 (... 25 8.1
At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase fam... 25 8.1
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 25 8.1
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 25 8.1
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 25 8.1
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 31.1 bits (67), Expect = 0.12
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 104 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDKPSRP 247
++A P P+ P+ GP P+S+ PA N+P Y +P P
Sbjct: 245 MMAPPPPYGQPPNAGPFTGNSPLSSPPAHSIPPPTNFPGVPYGRPPMP 292
>At5g59460.1 68418.m07452 scarecrow-like transcription factor 11
(SCL11) identical to cDNA scarecrow-like 11 (SCL11)
mRNA, partial cds gi:4580526
Length = 172
Score = 29.5 bits (63), Expect = 0.38
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 65 NSGVPSDGNSD--HVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDKP 238
N G PS +S+ + P+ +PS G+ + + + N PN P+ +DKP
Sbjct: 82 NGGNPSSSSSNGGKKSFSEPESSKVEPSGETDGDLKRKQSEVVSEEQNRPNKSPRSFDKP 141
Query: 239 S 241
S
Sbjct: 142 S 142
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 137 PSNGPSGNYEPISTGPAFVDFNHP-NYPPKRYDKP 238
PS+ PS ++ P TGP+ + HP ++ P D P
Sbjct: 236 PSSYPSNDHLPPPTGPSDSPYPHPYSHQPYHQDPP 270
Score = 25.8 bits (54), Expect = 4.6
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 113 NPDPFFSQPSNGPSGNYEPISTGP 184
NP+P++S P + P+ + S+ P
Sbjct: 316 NPEPYYSSPHSAPAPSSTSFSSAP 339
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 116 PDPFFSQPSNGPSG--NYEPISTGPAFVDFNHPNYPPKRYDKP 238
P P S P N P ++ P + P+ +N P PP YD P
Sbjct: 357 PYPQQSYPPNPPRQPPSHPPPGSAPSQQYYNAPPTPPSMYDGP 399
>At1g14700.1 68414.m01757 purple acid phosphatase, putative contains
Pfam profile: PF00149 calcineurin-like phosphoesterase;
similar to purple acid phosphatase (GI:20257479)
[Arabidopsis thaliana]
Length = 366
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -1
Query: 82 RWNTTIVHHVNSVCGSHGQYGEEEKH 5
+W I HH G HG E EKH
Sbjct: 239 KWKIVIGHHTIKSAGHHGNTIELEKH 264
>At4g24150.1 68417.m03465 expressed protein ; expression supported
by MPSS
Length = 493
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 44 NRVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF 190
N+ + +SG+ + S + DPFFS S+G G AF
Sbjct: 102 NQAYTSSHSGMFTPAGSGSAAVTVADPFFSLSSSGEMRRSMNEDAGAAF 150
>At1g32350.1 68414.m03988 alternative oxidase, putative similar to
Alternative oxidase 1a, mitochondrial precursor from
Arabidopsis thaliana [SP|Q39219], alternative oxidase 2,
mitochondrial precursor from Nicotiana tabacum
[SP|Q40578]; contains Pfam profile PF01786 Alternative
oxidase
Length = 318
Score = 26.2 bits (55), Expect = 3.5
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 59 VDNSGVPSDGNSDHVVIANPDP-FFSQPSNGP-SGNYEP---ISTGPAFVDFNHPNYPPK 223
V +SG+ G H++ P+ S ++ P SGN +P I T V + PP
Sbjct: 18 VQSSGLGIGGFRGHLISHLPNVRLLSSDTSSPVSGNNQPENPIRTADGKVISTYWGIPPT 77
Query: 224 RYDKPSRPWWEVN 262
+ KP W+ N
Sbjct: 78 KITKPDGSAWKWN 90
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +2
Query: 68 SGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHP 208
SG SD + F ++G SG Y P GP V P
Sbjct: 4 SGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFP 50
>At3g12420.1 68416.m01547 hypothetical protein
Length = 308
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = +2
Query: 110 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHP------NYPPKRYDKPSRP 247
ANP P + P +Y+P + +HP N PP RYD P
Sbjct: 73 ANPPPDRYYSDHHPPRSYDPNPPPNRYYSDHHPPRSYDRNPPPNRYDANDLP 124
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 113 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 220
+P P S PS+ P + P S P + + P PP
Sbjct: 37 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP 72
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 113 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 220
+P P S PS+ P + P S P + + P PP
Sbjct: 86 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP 121
>At5g07400.1 68418.m00847 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1084
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 65 NSGVPSDGNSDHVVIANPD 121
N+ VP+D N+ V++ NPD
Sbjct: 661 NTNVPADPNAVRVLVPNPD 679
>At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 456
Score = 25.4 bits (53), Expect = 6.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 3 SCFSSSPYWPWLP 41
SC SSP+ PW+P
Sbjct: 105 SCIISSPFTPWVP 117
>At2g15520.1 68415.m01776 zinc finger protein, putative strong
similarity to zinc finger protein [Arabidopsis thaliana]
GI:976277
Length = 483
Score = 25.4 bits (53), Expect = 6.1
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 107 IANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPK--RYDKPSRPWWEV 259
+A PF P+ G +E STG N PPK R KP P + V
Sbjct: 385 LALSQPFTDSPTVYSPGLFETGSTGTFQKKAKQRNRPPKHARKPKPRDPHYNV 437
>At1g58440.1 68414.m06648 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2) 6566341 dbj AB008021.1 AB008021
Length = 531
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 56 VVDNSGVPSDGNSDHVVIANPDPFFSQP 139
V++N +P N HVV+A+P P P
Sbjct: 244 VLENCNLPY-ANHGHVVLADPSPILMYP 270
>At5g21080.1 68418.m02510 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 980
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 71 GVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 163
G P+ N N PFF+ PS+ P N+
Sbjct: 940 GAPAASNICVTEYQNQPPFFNPPSSTPFDNF 970
>At4g22740.2 68417.m03281 glycine-rich protein
Length = 356
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 119 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDKPSRP 247
DPFF+QP G G ++ GP+ F + P+ + + ++P
Sbjct: 59 DPFFTQPFGG--GMFQSNFFGPSMNPFAEMHRLPQGFIENNQP 99
>At4g22740.1 68417.m03280 glycine-rich protein
Length = 356
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 119 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDKPSRP 247
DPFF+QP G G ++ GP+ F + P+ + + ++P
Sbjct: 59 DPFFTQPFGG--GMFQSNFFGPSMNPFAEMHRLPQGFIENNQP 99
>At4g14970.1 68417.m02301 hypothetical protein
Length = 1286
Score = 25.0 bits (52), Expect = 8.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 257 LPTTAEKVCRIAWVDNWDD*NRRTPVQCLWVHNFR 153
L T+AEK+ R WVD D C +V N R
Sbjct: 1062 LGTSAEKLLRHKWVDESTDNKGLKNKVCPFVSNLR 1096
>At4g11850.1 68417.m01886 phospholipase D gamma 1 / PLD gamma 1
(PLDGAMMA1) identical to phospholipase D gamma 1
SP:Q9T053 from [Arabidopsis thaliana]
Length = 858
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 194 DFNHPNYPPKRYDKPSRPWWEVN 262
DF++PN+ D P PW +++
Sbjct: 418 DFHNPNFVTTADDGPREPWHDLH 440
>At4g11840.1 68417.m01885 phospholipase D gamma 3 / PLD gamma 3
(PLDGAMMA3) identical to phospholipase D gamma 3
sp:Q9T052 from [Arabidopsis thaliana]
Length = 866
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 194 DFNHPNYPPKRYDKPSRPWWEVN 262
DF++PN+ D P PW +++
Sbjct: 425 DFHNPNFVTTADDGPREPWHDLH 447
>At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase family
protein similar to peroxisomal-coenzyme A synthetase
(FAT2) [gi:586339] from Saccharomyces cerevisiae;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA; identical to cDNA adenosine
monophosphate binding protein 3 AMPBP3
(AMPBP3)GI:20799714
Length = 514
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 9 FSSSPYWPWLPQTEFTWWTIV 71
FS++ +WP + + TW+T V
Sbjct: 240 FSATTFWPDMKKYNATWYTAV 260
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 77 PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNY 214
PS ++ NP+ +S +N P ++ P++ P + P Y
Sbjct: 82 PSSSSTPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRY 127
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 59 VDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGN 160
VD+ VP G S + P+P + P N P N
Sbjct: 434 VDSLFVPRAGPSSAIHTPQPNPTWIPPQNAPPHN 467
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 59 VDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGN 160
VD+ VP G S + P+P + P N P N
Sbjct: 434 VDSLFVPRAGPSSAIHTPQPNPTWIPPQNAPPHN 467
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,804,633
Number of Sequences: 28952
Number of extensions: 134527
Number of successful extensions: 421
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 251821800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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