SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D06
         (255 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   2.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   2.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   8.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   8.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    19   8.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    19   8.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 205 YTEVCTCTCPDG 240
           Y +  TCTCP G
Sbjct: 3   YVDSYTCTCPLG 14



 Score = 19.4 bits (38), Expect = 6.3
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +1

Query: 223 CTCPDG 240
           CTCP+G
Sbjct: 362 CTCPEG 367


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 70  VALTYVNGNKVKSYICQGY 126
           + L +  G  +KS+  QGY
Sbjct: 79  IILVFSKGKVIKSFFNQGY 97


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.8 bits (39), Expect = 4.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 126 LRLREMLCSPWFRLREVK 179
           LRL E     WF+ R VK
Sbjct: 154 LRLSEKQVKIWFQNRRVK 171


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory
          receptor candidate 16 protein.
          Length = 452

 Score = 19.4 bits (38), Expect = 6.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 46 ILAVLLGLVALTYVNGN 96
          +L+ +LG+  ++Y N N
Sbjct: 15 LLSKILGIAPISYKNSN 31


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 74   ATRPSKTARIVNFDISFLVHSL 9
            A  PSKT     +D+  L  +L
Sbjct: 1561 AVSPSKTVIDAGYDVPVLAQNL 1582


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 205 YTEVCTCTCPD 237
           YT   TC CP+
Sbjct: 285 YTGRATCDCPN 295


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 123 ILRLREMLCSPWF 161
           IL +   LCS WF
Sbjct: 214 ILAMLNCLCSLWF 226


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 123 ILRLREMLCSPWF 161
           IL +   LCS WF
Sbjct: 214 ILAMLNCLCSLWF 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,517
Number of Sequences: 336
Number of extensions: 1235
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3951341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)

- SilkBase 1999-2023 -