Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_D06
(255 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 28 0.23
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 27 0.40
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 25 1.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 1.6
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 25 1.6
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 24 2.8
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 24 3.7
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 24 3.7
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 23 4.9
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 23 4.9
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 23 6.4
SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr... 23 6.4
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 23 6.4
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 23 8.5
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 23 8.5
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 23 8.5
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.9 bits (59), Expect = 0.23
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 43 TILAVLLGLVALTYVNGNKVKSYICQG-YYGCEKCCVHLGSGCEKLKSSPFW 195
T+L + L LV+ T + + C G YY CCV +GS C + S+P++
Sbjct: 9 TVLTLALSLVSKTSASQCSPRYGTCGGIYYDGPTCCV-VGSSC--IYSNPWY 57
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 0.40
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 96 ITVDVSQGYEAQ*NSQDCEFRHF 28
+ VDV +G+E +++DCEF+ F
Sbjct: 162 MAVDVPEGFELLGSTEDCEFQIF 184
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 1.2
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 79 TYVNGNKVKSYIC--QGYYGCEKCCVHLGSGCEKLKSSPFWFG 201
T+ + N++ C + +Y + C H G+ K ++S +W G
Sbjct: 361 TFEHANRIICGYCAMESFYKKDATCPHCGNMTVKKQTSAYWEG 403
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 123 ILRLREMLCSPWFRLREVKIL 185
+L+L E + PW REVK+L
Sbjct: 120 VLKLLENMPMPWEEYREVKVL 140
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.0 bits (52), Expect = 1.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 200 PNQNGEDFNFSQPEPR*TQHFSQP 129
PNQ + NFS QHFSQP
Sbjct: 223 PNQYNPEPNFSLSSGYPQQHFSQP 246
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 24.2 bits (50), Expect = 2.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 19 TRNEMSKFTILAVLLGLVALTYVNGNKVKSYIC 117
T E+ FTIL + GL+ + N + +Y C
Sbjct: 684 THLEIEPFTILGAVAGLIPYPHHNQSPRNTYQC 716
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 23.8 bits (49), Expect = 3.7
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 25 NEMSKFTILAVLLGLVALTYVNGNKVKSY 111
NE++ +I + L+ Y NGN++ S+
Sbjct: 864 NELANLSISSTAQVLLETLYANGNRLSSF 892
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 95 LPLT*VKATRPSKTARIVNFD 33
+P T +K+T SKT I+ FD
Sbjct: 1 MPATILKSTASSKTLLIIKFD 21
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 23.4 bits (48), Expect = 4.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 223 RCRPQCNFRTRTARILTSRSRNQGEHSISRNRSIL 119
RCR +CN+R R + + G + R+IL
Sbjct: 252 RCRVECNWRHGRCRQVVLSGHSDGVMCLQLVRNIL 286
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 23.4 bits (48), Expect = 4.9
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +1
Query: 70 VALTYVNGNKVKSYICQGYYGCEKCCVHLGSGCEKLKSSPFWF 198
V L+Y G ++ I Y +K + +G P WF
Sbjct: 549 VQLSYTRGTDARNAIILSYSEVQKILTSVATGFAGAMIFPVWF 591
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 23.0 bits (47), Expect = 6.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +1
Query: 157 GSGCEKLKSSPFWFGSYTEVCTC 225
G G L S+PFW ++ C
Sbjct: 2373 GDGSSILASAPFWINIICQLAIC 2395
>SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 23.0 bits (47), Expect = 6.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 97 KVKSYICQGYYGCEKCCVHLGSGCEKL 177
KVK I G+YGC LG L
Sbjct: 126 KVKHIIVCGHYGCGGVAAALGPNLNNL 152
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 23.0 bits (47), Expect = 6.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 123 ILRLREMLCSPW 158
+LRLR+ C PW
Sbjct: 553 LLRLRQFCCHPW 564
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 22.6 bits (46), Expect = 8.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 123 ILRLREMLCSPW 158
+LRLR+ C PW
Sbjct: 693 LLRLRQACCHPW 704
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 22.6 bits (46), Expect = 8.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 163 GCEKLKSSPFWFGSYTEVCT 222
GC+ LK P +Y ++CT
Sbjct: 7 GCQHLKLKPADVENYQKICT 26
>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
Aif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 22.6 bits (46), Expect = 8.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 174 LLAAGTKVNTAFLATVVSL 118
+LAAG K N +L VSL
Sbjct: 394 ILAAGVKPNLRYLGNAVSL 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,055,992
Number of Sequences: 5004
Number of extensions: 18473
Number of successful extensions: 53
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 49493712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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