Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D06
         (255 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130006-1|AAN05090.1|   90|Homo sapiens MU-MB-2.76 protein.           29   3.6  
AB058756-1|BAB47482.1|  708|Homo sapiens KIAA1853 protein protein.     27   8.3  

>AY130006-1|AAN05090.1|   90|Homo sapiens MU-MB-2.76 protein.
          Length = 90

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 229 RYRCRPQCNFRTRTARILTSRSRNQGEHSISRNRS 125
           R R R +   RTRT+   +SRS + G  S SR+RS
Sbjct: 32  RSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRS 66


>AB058756-1|BAB47482.1|  708|Homo sapiens KIAA1853 protein protein.
          Length = 708

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 223 RCRPQCNFRTRTARILTSRSRNQGEHSISRNRS 125
           R R +   RTRT+   +SRS + G  S SR+RS
Sbjct: 652 RSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRS 684


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,362,887
Number of Sequences: 237096
Number of extensions: 801563
Number of successful extensions: 2711
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 62
effective length of database: 62,159,110
effective search space used: 1367500420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)