Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D06
         (255 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.083
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   1.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   1.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   1.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   9.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   9.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.8 bits (54), Expect = 0.083
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 237 VWTGTGADLSVTSEPERRGF 178
           VW   GADL   +EPE R F
Sbjct: 343 VWRRNGADLETLNEPEIRVF 362


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 22  RNEMSKFTILAVLLGLV 72
           +N +  FTI AVL+GL+
Sbjct: 62  KNMLLVFTIAAVLVGLI 78


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +1

Query: 145 CVHLGSGCEKLKSSPFWFGSYTEVCTCTCPDGV 243
           C  +   C  L        S + + +C CPDG+
Sbjct: 36  CQAVNGHCSHLCLPAPRINSKSPLLSCACPDGL 68


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +1

Query: 145 CVHLGSGCEKLKSSPFWFGSYTEVCTCTCPDGV 243
           C  +   C  L        S + + +C CPDG+
Sbjct: 36  CQAVNGHCSHLCLPAPRINSKSPLLSCACPDGL 68


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 54  SQDCEFRHFVPRSLTV 7
           S  CE R F P+S  V
Sbjct: 413 SGKCEHRPFEPKSTAV 428


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 217 CTCTCPDGVDPYL 255
           CTC     +DPY+
Sbjct: 315 CTCKAVACLDPYV 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,308
Number of Sequences: 438
Number of extensions: 1292
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)