Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_D03
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 32 0.23
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 32 0.23
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 29 2.8
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 29 2.8
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 29 2.8
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 29 2.8
Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical pr... 27 6.5
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 27 6.5
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 27 8.6
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +3
Query: 249 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEI-DKFLGDVDYSEATNPYISLSKTFSEMNPD 425
++++V SPL + +++ L +G SR +I + L + + +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 426 FFT-MANKIYVGNKYTLDEKFTSSS-RQYQSEVETIDFS 536
+ANK+Y+ +T++ F S++ + Y ++ +++D +
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +3
Query: 249 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEI-DKFLGDVDYSEATNPYISLSKTFSEMNPD 425
++++V SPL + +++ L +G SR +I + L + + +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 426 FFT-MANKIYVGNKYTLDEKFTSSS-RQYQSEVETIDFS 536
+ANK+Y+ +T++ F S++ + Y ++ +++D +
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 393 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 530
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 393 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 530
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 393 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 530
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 393 LSKTFSE-MNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 530
L+K+ SE + +F +I V NKY D+K ++S + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical
protein C38C10.4 protein.
Length = 525
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 387 ISLSKTFSEMNPDFFTMANKIYV--GNKYTLDEKFTSSSRQYQSEVETIDFS 536
I+ K F+E N + KI + +LDEK+ S R+YQ E IDF+
Sbjct: 169 IAAVKLFNENNTEGAVSETKIMLIEAKCLSLDEKYEESRRKYQ---ECIDFA 217
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 387 ISLSKTFSEMNPDFFTMANKIYV--GNKYTLDEKFTSSSRQYQSEVETIDFS 536
I+ K F+E N + KI + +LDEK+ S R+YQ E IDF+
Sbjct: 169 IAAVKLFNENNTEGAVSETKIMLLEAKCLSLDEKYEESRRKYQ---ECIDFA 217
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 354 DVDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKY----TLDEKFTSSSRQYQSEVE 521
++D T+P L + S+ PD T +I V N+ + EK ++Y++ +
Sbjct: 789 ELDIHLKTDPTAYLDEKSSDEEPDVMTWKRRILVKNRLDGRDVMGEKRKKEMKEYRANRK 848
Query: 522 TIDF 533
TI++
Sbjct: 849 TINW 852
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,902,166
Number of Sequences: 27780
Number of extensions: 242913
Number of successful extensions: 746
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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