Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_D02
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.6  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 85  DSSNLGHECLNLTLNQKLCLIIM--YKKNFFFLL 180
           D + L H C    L++KL  II+  +  NF+F++
Sbjct: 270 DYNRLCHLCF--LLDEKLSYIILTSFLNNFYFII 301


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 6   NAYFLYLICSYIHMYNII*FVN 71
           +A F+ LI S++H  +   FVN
Sbjct: 92  SAVFIMLIISFMHKKSFKNFVN 113


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 116 FRHSCPRLELSYKCYIN 66
           F  SCP   L Y C IN
Sbjct: 244 FSCSCPSGTLGYICEIN 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,168
Number of Sequences: 336
Number of extensions: 2206
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)