Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_D01
(461 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1078 - 30655212-30655289,30655614-30655811,30655916-306560... 110 6e-25
02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237... 81 4e-16
05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851,666... 80 1e-15
01_06_0881 + 32692345-32692497,32693167-32693286,32693382-326934... 66 2e-11
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 30 0.79
02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931... 28 3.2
02_05_0113 - 25941189-25941519,25941630-25941925,25942238-259429... 28 3.2
05_02_0075 - 6359897-6360292,6360463-6360465 28 4.2
01_03_0011 + 11630506-11630853 28 4.2
11_04_0059 + 12981201-12981290,12981548-12981739 27 7.3
01_06_1835 + 40223645-40224148,40224893-40225189,40225344-402254... 27 7.3
08_02_1323 - 26136015-26137876,26138300-26139229,26139922-261400... 27 9.7
08_02_1149 + 24706429-24708105 27 9.7
>04_04_1078 -
30655212-30655289,30655614-30655811,30655916-30656086,
30656172-30656252,30656464-30656565,30656671-30656779,
30656900-30656965,30657566-30657630,30658386-30658475,
30658952-30659123,30659831-30659943,30660046-30660219,
30660300-30660347,30662041-30662205
Length = 543
Score = 110 bits (264), Expect = 6e-25
Identities = 65/152 (42%), Positives = 85/152 (55%)
Frame = +2
Query: 5 HAWNNYKLYAWGKNELKPMSKRAHLSSVFGASDLGLTIVDGLSTLYLMGLNDEFREGRDW 184
HAWN+Y YAWG +EL+P SK S FG LG T+VD L TLY+MGL DEF+ R+
Sbjct: 113 HAWNSYVKYAWGMDELQPQSKNGVNS--FGG--LGATLVDSLDTLYIMGLKDEFQRARE- 167
Query: 185 VAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRDKAVEVADALLPAFQTPTGL 364
+GGLLS Y L+GD VF +KA ++ D LLPA+ TP+G+
Sbjct: 168 ----------------------VVGGLLSAYDLSGDKVFLEKAKDITDRLLPAWDTPSGI 205
Query: 365 PYALINPSTKASKQYHWAGPNSILSELGTLHL 460
PY IN + + W +SIL++ GT L
Sbjct: 206 PYNRINLAHGRAHNPGWTNGDSILADSGTEQL 237
>02_05_0701 +
31022485-31022648,31023569-31023611,31023712-31023777,
31024007-31024062,31024091-31024190,31024290-31024472,
31024953-31025001,31025089-31025169,31025209-31025268,
31025394-31025514,31025612-31025693,31025783-31025868,
31026011-31026111,31026246-31026387,31026488-31026638,
31026710-31026937
Length = 570
Score = 81.0 bits (191), Expect = 4e-16
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 24/174 (13%)
Frame = +2
Query: 5 HAWNNYKLYAWGKNELKPMSKR-----AHLSSVFGASDLGL----TIVDGLSTLYLMGLN 157
HA++NY YA+ +ELKP++K + L ++ +D + TI+ + +L ++G
Sbjct: 58 HAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNNVNDDIVSSENTIIRKVDSLVVLGNL 117
Query: 158 DEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTG-------DTVFRDKAV 316
EF G W++E+L F +VD +++FE IR +GGL+S + L D ++D+ +
Sbjct: 118 TEFERGVLWLSENLTF-DVDARINLFECNIRLLGGLISGHILAKEHSSHLKDGPYQDQLL 176
Query: 317 EVADAL----LPAFQTPTGLPYALIN----PSTKASKQYHWAGPNSILSELGTL 454
+A+ L LPAF+TPTGLPYA IN + + +G S++ E+G L
Sbjct: 177 HLAENLGSRFLPAFETPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGAL 230
>05_02_0107 -
6667944-6668214,6668376-6668524,6668654-6668851,
6668989-6669250,6669378-6670327,6670907-6671022,
6671121-6671280
Length = 701
Score = 79.8 bits (188), Expect = 1e-15
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 QHAWNNYKLYAWGKNELKPMSKRAHLSSVFGASDLGLTIVDGLSTLYLMGLNDEFREGRD 181
+HAW+ Y+ YA G +EL P+++R + G LG T+VD L T +MG +D E
Sbjct: 203 EHAWSGYRNYAMGYDELMPLTRRG----IDGLGGLGATVVDSLDTAIIMGADDVVSEASK 258
Query: 182 WVAEHLHFNEVDT-ELSVFETTIRFIGGLLSCYSLTG 289
W+ ++L + ++++FETTIR +GGLLS Y L+G
Sbjct: 259 WIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSG 295
>01_06_0881 +
32692345-32692497,32693167-32693286,32693382-32693474,
32694197-32694283,32696052-32696063,32696553-32696625,
32697073-32697182,32697608-32697658,32698154-32698242,
32698518-32698599,32698680-32698793,32699015-32699094,
32699749-32699884,32700210-32700280,32700363-32700457,
32700467-32700597,32701009-32701398
Length = 628
Score = 65.7 bits (153), Expect = 2e-11
Identities = 35/96 (36%), Positives = 60/96 (62%)
Frame = +2
Query: 5 HAWNNYKLYAWGKNELKPMSKRAHLSSVFGASDLGLTIVDGLSTLYLMGLNDEFREGRDW 184
HA++ Y +A+ +EL+P+S + S+ G + LT++D L TL L+G + F +W
Sbjct: 58 HAFDGYMQHAFPLDELRPLSCQGE-DSLGGYA---LTLIDSLDTLALLGDKERFDAAVEW 113
Query: 185 VAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGD 292
V +++ F +++ +SVFET IR +GGLLS + + D
Sbjct: 114 VGKNVRF-DINKTVSVFETNIRILGGLLSAHLIASD 148
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 30.3 bits (65), Expect = 0.79
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 160 IIESHQVESAESVYDGESEVASAEHARQVSAFRHRFQLILAPSI 29
++++ Q +AE + DG + + EH RQ + RF + APS+
Sbjct: 277 LVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSV 320
>02_05_0118 -
25991356-25991686,25991797-25992092,25992405-25993109,
25993197-25993298,25993519-25993846,25994337-25994461,
25994555-25994628,25995110-25995191,25995278-25995391,
25995475-25995575,25995663-25995752,25996316-25996562
Length = 864
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 239 TTIRFIGGLLSCYSLTGDTVFRDKAVEVADALLPAFQTPTGLPYALINPSTKASKQYHWA 418
+ +R IG SC SLTG T+F D ++ L + G P S + H+
Sbjct: 542 SNLRVIGRSRSCRSLTGSTMFDDMEMDDCTPLNRSLVEFPGRPV----ESHRRGSALHYD 597
Query: 419 GPNSILSELGTL 454
LS G++
Sbjct: 598 AETDTLSRAGSM 609
>02_05_0113 -
25941189-25941519,25941630-25941925,25942238-25942942,
25943030-25943131,25943352-25943679,25944170-25944294,
25944388-25944453,25945046-25945109,25945739-25945821,
25945917-25945943
Length = 708
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 239 TTIRFIGGLLSCYSLTGDTVFRDKAVEVADALLPAFQTPTGLPYALINPSTKASKQYHWA 418
+ +R IG SC SLTG T+F D ++ L + G P S + H+
Sbjct: 386 SNLRVIGRSRSCRSLTGSTMFDDMEMDDCTPLNRSLVEFPGRPV----ESHRRGSALHYD 441
Query: 419 GPNSILSELGTL 454
LS G++
Sbjct: 442 AETDTLSRAGSM 453
>05_02_0075 - 6359897-6360292,6360463-6360465
Length = 132
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 86 VFGASDLGLTIVDGLSTLYLMGLNDEFREGRDWVAEHLHFNEVDTEL 226
V+ D+ +T+V + +M E R W+ +HLH V +L
Sbjct: 86 VYAVDDIPMTVVSVIPEETVMHTCQEKRRDALWMLKHLHIPRVSLDL 132
>01_03_0011 + 11630506-11630853
Length = 115
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 189 PNICISTKSIRSYRYSRQPSGSSVDSCR 272
P I ++ SYR+ RQPS SS D R
Sbjct: 56 PIIVNHYRACNSYRFHRQPSSSSTDRLR 83
>11_04_0059 + 12981201-12981290,12981548-12981739
Length = 93
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 334 KCVGHFHCFIPEHCVTGQRI 275
K V +F C +P HC TG ++
Sbjct: 69 KGVNYFICGVPGHCATGMKL 88
>01_06_1835 +
40223645-40224148,40224893-40225189,40225344-40225439,
40225595-40225748,40225773-40226011
Length = 429
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 204 STKSIRSYRYSRQPSGSSVDSCRVIR*PVTQC 299
ST+ +RS ++ P+G + SCR+ V+ C
Sbjct: 300 STEGMRSSKFCLHPAGDTPSSCRLFDAIVSHC 331
>08_02_1323 -
26136015-26137876,26138300-26139229,26139922-26140068,
26140139-26140360,26140513-26140555
Length = 1067
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 334 KCVGHFHCFIPEHCVTGQRITRQESTDE 251
+C+G C +PEH G R++ + S DE
Sbjct: 213 QCMGSTSCLVPEH-GDGARLSSEFSADE 239
>08_02_1149 + 24706429-24708105
Length = 558
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 206 NEV-DTELSVFETTIRFIGGLLS-CYSLTGDTVFRDKAVEVADALLPAFQTP 355
NEV D L + T R G + + C + V+RDK++E++ P F P
Sbjct: 220 NEVKDATLPPLKRTKRMDGTVTTHCSAKRKGIVYRDKSMEMSSLKSPVFHVP 271
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,322,700
Number of Sequences: 37544
Number of extensions: 236300
Number of successful extensions: 671
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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