Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C22
(511 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.37
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.37
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.49
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.49
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 31 0.64
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z49911-8|CAD59151.1| 250|Caenorhabditis elegans Hypothetical pr... 30 0.85
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 30 0.85
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 30 1.1
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 1.1
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.1
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.1
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 29 2.6
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 29 2.6
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 29 2.6
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 29 2.6
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 3.4
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 3.4
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 28 3.4
U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical pr... 28 3.4
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 28 3.4
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 28 4.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.0
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 7.9
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.5 bits (68), Expect = 0.37
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 73 NQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXX 252
++AP T PT+ ++P+ +PT + G T P ++ + PT AP VNP
Sbjct: 609 SKAPVVTTSPTLAPTSPTKLPT-SPPSTVGTSPTAPANLTT----PTTAP--VNPTSSTT 661
Query: 253 XXXXXXXXESAPSA-IVPTVNTNDTPCITKT 342
S +A VP V T T T
Sbjct: 662 APTAPVNPTSPTTAPTVPPVTTTTPTTTTST 692
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.37
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 73 NQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXX 252
++AP T PT+ ++P+ +PT + G T P ++ + PT AP VNP
Sbjct: 665 SKAPVVTTSPTLAPTSPTKLPT-SPPSTVGTSPTAPANLTT----PTTAP--VNPTSSTT 717
Query: 253 XXXXXXXXESAPSA-IVPTVNTNDTPCITKT 342
S +A VP V T T T
Sbjct: 718 APTAPVNPTSPTTAPTVPPVTTTTPTTTTST 748
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 34 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNT 147
+ L +++++ + + TTT+KP+ T + PS PT T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTT 612
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 34 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNT 147
+ L +++++ + + TTT+KP+ T + PS PT T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTT 612
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 30.7 bits (66), Expect = 0.64
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 76 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNP 237
+AP TT+ P T + P+ N + Y++ D S PTQ P T P
Sbjct: 237 KAPPTTRTPPTTRTPPTTSQPAEFNIDDDDYESSEDISESHTTPPTQTPPTQTP 290
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 76 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXXX 255
+ PTTT++PT T P+ T T Y+T DD + IP + T
Sbjct: 3012 EEPTTTEEPTTTTEEPT---TTTTEEPYHIYETSRDDDPEII-IPVETTTT-----STTT 3062
Query: 256 XXXXXXXESAPSAIVPT--VNTND 321
E+ P+ ++PT V ND
Sbjct: 3063 TSTTEEPEAEPALVLPTDPVEEND 3086
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 76 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXXX 255
+ PTTT++PT T P+ T T Y+T DD + IP + T
Sbjct: 3012 EEPTTTEEPTTTTEEPT---TTTTEEPYHIYETSRDDDPEII-IPVETTTT-----STTT 3062
Query: 256 XXXXXXXESAPSAIVPT--VNTND 321
E+ P+ ++PT V ND
Sbjct: 3063 TSTTEEPEAEPALVLPTDPVEEND 3086
>Z49911-8|CAD59151.1| 250|Caenorhabditis elegans Hypothetical
protein M28.10 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 61 FKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGT 228
F P+ +T P+ T S S V V NG+ T P ++ + T APG+
Sbjct: 141 FSPPSTIAPSTIAPSTTASDVSTVNPVTDNGSTVSQGTQPTGGSTAAPVSTDAPGS 196
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 76 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXXX 255
+ PTTT++PT T P+ T T Y+T DD + IP + T
Sbjct: 562 EEPTTTEEPTTTTEEPT---TTTTEEPYHIYETSRDDDPEII-IPVETTTT-----STTT 612
Query: 256 XXXXXXXESAPSAIVPT--VNTND 321
E+ P+ ++PT V ND
Sbjct: 613 TSTTEEPEAEPALVLPTDPVEEND 636
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = +1
Query: 43 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNR--GRYDTDPDDINSVFKIPTQ 216
+E + K+ +APTTT KP +PT ++ Y D DD V K P
Sbjct: 466 DEFSKNAKLDVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTPDM 524
Query: 217 APGTVNPVXXXXXXXXXXXXESAPSAIVPTVNTND 321
V V + AP + +V T+D
Sbjct: 525 KK-KVKVVDIKPKEVTIEEEKKAPKLVETSVQTDD 558
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 79 APTTTKKPTMTVSAPSAVPTVNTN 150
APTTT+KPT T + P+ T T+
Sbjct: 442 APTTTQKPTTTTTTPAPTTTSTTS 465
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3962 STGSFVTDEGQTIEKDDEGKPLGP 3985
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3243 STGSFVTDDGQIIEKDDEGKPLGP 3266
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3388 STGSFVTDDGQIIGKDDEGKPLGP 3411
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 5492 STGSFVTDDGQIIEKDDEGKPLGP 5515
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 7385 STGAFVTDDGQVIEKDDEGKPIGP 7408
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 8159 STGAFVTDDGQVIEKDDEGKPIGP 8182
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 9922 STGAFVTDDGQVIEKDDEGKPIGP 9945
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 4107 STGTFVTDDGQIIEKDDEGKPLGP 4130
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 7724 STGSFVADDGQIIEKDDEGKPIGP 7747
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 8498 STGSFVADDGQIIEKDDEGKPIGP 8521
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 10261 STGSFVADDGQIIEKDDEGKPIGP 10284
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G ++ GQ I K+DE PLGP
Sbjct: 3533 STGSFVTEDGQIIEKDDEGKPLGP 3556
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G SD GQ I K+D+ PLGP
Sbjct: 3819 GSFVSDDGQIIEKDDDGKPLGP 3840
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G ++ GQ I K+DE PLGP
Sbjct: 4192 STGSFVTEDGQIIEKDDEGKPLGP 4215
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 6425 GSFITDDGQAIEKDDEGKPIGP 6446
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 7871 GSFVTDDGQAIGKDDEGKPIGP 7892
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 8016 GSFVTDDGQAIEKDDEGKPIGP 8037
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 9205 GSFVTDDGQAIEKDDEGKPIGP 9226
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 4007 STGSFVTDEGQTIEKDDEGKPLGP 4030
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3288 STGSFVTDDGQIIEKDDEGKPLGP 3311
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3433 STGSFVTDDGQIIGKDDEGKPLGP 3456
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 5537 STGSFVTDDGQIIEKDDEGKPLGP 5560
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 7430 STGAFVTDDGQVIEKDDEGKPIGP 7453
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 8204 STGAFVTDDGQVIEKDDEGKPIGP 8227
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 9967 STGAFVTDDGQVIEKDDEGKPIGP 9990
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 4152 STGTFVTDDGQIIEKDDEGKPLGP 4175
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 7769 STGSFVADDGQIIEKDDEGKPIGP 7792
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 8543 STGSFVADDGQIIEKDDEGKPIGP 8566
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 10306 STGSFVADDGQIIEKDDEGKPIGP 10329
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G ++ GQ I K+DE PLGP
Sbjct: 3578 STGSFVTEDGQIIEKDDEGKPLGP 3601
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G SD GQ I K+D+ PLGP
Sbjct: 3864 GSFVSDDGQIIEKDDDGKPLGP 3885
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G ++ GQ I K+DE PLGP
Sbjct: 4237 STGSFVTEDGQIIEKDDEGKPLGP 4260
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 6470 GSFITDDGQAIEKDDEGKPIGP 6491
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 7916 GSFVTDDGQAIGKDDEGKPIGP 7937
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 8061 GSFVTDDGQAIEKDDEGKPIGP 8082
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 9250 GSFVTDDGQAIEKDDEGKPIGP 9271
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 4007 STGSFVTDEGQTIEKDDEGKPLGP 4030
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3288 STGSFVTDDGQIIEKDDEGKPLGP 3311
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 3433 STGSFVTDDGQIIGKDDEGKPLGP 3456
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 5537 STGSFVTDDGQIIEKDDEGKPLGP 5560
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 7430 STGAFVTDDGQVIEKDDEGKPIGP 7453
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 8204 STGAFVTDDGQVIEKDDEGKPIGP 8227
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 9967 STGAFVTDDGQVIEKDDEGKPIGP 9990
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE PLGP
Sbjct: 4152 STGTFVTDDGQIIEKDDEGKPLGP 4175
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 7769 STGSFVADDGQIIEKDDEGKPIGP 7792
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 8543 STGSFVADDGQIIEKDDEGKPIGP 8566
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G +D GQ I K+DE P+GP
Sbjct: 10306 STGSFVADDGQIIEKDDEGKPIGP 10329
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G ++ GQ I K+DE PLGP
Sbjct: 3578 STGSFVTEDGQIIEKDDEGKPLGP 3601
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G SD GQ I K+D+ PLGP
Sbjct: 3864 GSFVSDDGQIIEKDDDGKPLGP 3885
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 500 SVGGL*SDTGQQISKNDEHPPLGP 429
S G ++ GQ I K+DE PLGP
Sbjct: 4237 STGSFVTEDGQIIEKDDEGKPLGP 4260
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 6470 GSFITDDGQAIEKDDEGKPIGP 6491
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 7916 GSFVTDDGQAIGKDDEGKPIGP 7937
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 8061 GSFVTDDGQAIEKDDEGKPIGP 8082
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 494 GGL*SDTGQQISKNDEHPPLGP 429
G +D GQ I K+DE P+GP
Sbjct: 9250 GSFVTDDGQAIEKDDEGKPIGP 9271
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/88 (30%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +1
Query: 82 PTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXXXXX 261
PTT T + P A PT T G T P + PT AP VNP
Sbjct: 487 PTTPTPVPTTTNTPPANPTTATPTTVGTIGTSP-TAPANLTTPTTAP--VNPTSSTTAPT 543
Query: 262 XXXXXESAPSA-IVPTVNTNDTPCITKT 342
S +A VP V T T T
Sbjct: 544 APVNPTSPTTAPTVPPVTTTTPTTTTST 571
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 4 SAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPD 183
S + +A +I+L+ I+SI + + TT + +VP V+TN R D D
Sbjct: 132 SKYPPGSAMNIELDGIHSISGVASSFYTTYTAINQVMIVGFSVPDVDTNLLRQSAIYDGD 191
Query: 184 DINSVF 201
+N+ F
Sbjct: 192 SVNAKF 197
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/84 (25%), Positives = 26/84 (30%)
Frame = +1
Query: 85 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXXXXXX 264
TTT PT T +AP+ T T T P +V T P T
Sbjct: 184 TTTTTPTTTTTAPTTTTTTPTTTT-----TTPTTTTTVPTTTTTTPTTTTTTTTTPTTTT 238
Query: 265 XXXXESAPSAIVPTVNTNDTPCIT 336
+ A + T TP T
Sbjct: 239 TTPTTTTTPATTTSETTTTTPTTT 262
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 70 PNQAPTTTKKPTMTVSAPSAVPTVNT 147
P TT KPT T + P+ PT T
Sbjct: 259 PTTTTQTTTKPTTTTTTPTTTPTTTT 284
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 4 SAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPD 183
S + +A +I+L+ I+SI + + TT + +VP V+TN R D D
Sbjct: 132 SKYPPGSAMNIELDGIHSISGVASSFYTTYTAINQVMIVGFSVPDVDTNLLRQSAIYDGD 191
Query: 184 DINSVF 201
+N+ F
Sbjct: 192 SVNAKF 197
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +1
Query: 79 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGT 228
APTTT T T +AP VPTV+ R T S TQAP T
Sbjct: 477 APTTTS--TTTTTAPITVPTVSPTTTTTR-QTTTTARTSTTTTTTQAPPT 523
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 183 IGVCIIASSITVGIYSRNS*W-GTNSHGWF 97
IGVC I +SI + S N W GT S W+
Sbjct: 486 IGVCCIVTSILCILISTNWTWKGTGSEAWY 515
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +1
Query: 79 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGT 228
APTTT T T +AP VPTV+ R T S TQAP T
Sbjct: 477 APTTTS--TTTTTAPITVPTVSPTTTTTR-QTTTTARTSTTTTTTQAPPT 523
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 109 TVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNP 237
T++APS +P N+N D D N V +P + NP
Sbjct: 442 TITAPSDIPRANSNFEEYPDDGGYDGTNDVAIVPLRTQHGTNP 484
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 109 TVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNP 237
T++APS +P N+N D D N V +P + NP
Sbjct: 767 TITAPSDIPRANSNFEEYPDDGGYDGTNDVAIVPLRTQHGTNP 809
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Frame = +1
Query: 43 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNR--GRYDTDPDDINSVFKIPTQ 216
+E + K+ +APTTT KP +PT ++ Y D DD V K P
Sbjct: 466 DEFSKNAKLDVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTPDM 524
Query: 217 APGT-VNPVXXXXXXXXXXXXESAPSAIVPTVNTND 321
V + + AP + +V T+D
Sbjct: 525 KKKVKVVDIKPKEIKVTIEEEKKAPKLVETSVQTDD 560
>U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical
protein T22F7.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 79 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPD 183
AP + P TV P+ P+V + GN G+ PD
Sbjct: 132 APGAPETPGATVPPPTMSPSVTSGGNPGKSLCPPD 166
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Frame = +1
Query: 43 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNR--GRYDTDPDDINSVFKIPTQ 216
+E + K+ +APTTT KP +PT ++ Y D DD V K P
Sbjct: 460 DEFSKNAKLDVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTPDM 518
Query: 217 APGT-VNPVXXXXXXXXXXXXESAPSAIVPTVNTND 321
V + + AP + +V T+D
Sbjct: 519 KKKVKVVDIKPKEIKVTIEEEKKAPKLVETSVQTDD 554
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = +1
Query: 85 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVXXXXXXXX 264
TTT PT T + + PT T + T + PT T +
Sbjct: 278 TTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTT-TASTTTFKTTTIT 336
Query: 265 XXXXESAPSAIVPTVN-TNDTPCITKT 342
+ P+ T T TP T+T
Sbjct: 337 TTTQTTTPTTTATTTKPTTTTPTTTRT 363
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 34 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPT 213
I L EI S K+ P+ KP S+P ++P T + Y TD S+ K
Sbjct: 330 IPLSEIKSDNKLSTVTPS---KPAEKKSSPKSLPPAETIVSNRPYLTDIAHGRSMLKKTV 386
Query: 214 QAPG 225
++PG
Sbjct: 387 RSPG 390
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 40 LEEINSIFKIPN-QAPTTTKKPTMTVSAPSAV-PTVNTNGNR--GRYDTDPDDINSV 198
+ E NSI I + PTT K T+T PS+V P+ N + N G P + +++
Sbjct: 666 ISEENSIENISKTKTPTTVPKSTITGRMPSSVNPSDNLSNNEMDGNAHNQPSEFSNL 722
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +1
Query: 52 NSIFKIPNQAPTTT-KKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGT 228
N + Q PTT+ +K T A S+ PT T + T P +S + + + T
Sbjct: 192 NETTSVTTQNPTTSNQKNETTDEATSSPPTTTTPTTTLKPTTSPQKPDSTEEATSPSQST 251
Query: 229 VNPVXXXXXXXXXXXXESAPSA 294
PV E+ A
Sbjct: 252 TTPVATQNPTTSNQKNETTDEA 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.129 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,139,955
Number of Sequences: 27780
Number of extensions: 268460
Number of successful extensions: 904
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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