Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C20
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical ... 80 1e-15
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF025453-10|AAK31402.3| 487|Caenorhabditis elegans Hypothetical... 29 3.3
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68114-7|CAA92161.1| 317|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 28 5.9
U50311-7|AAA92311.1| 401|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical
protein T22D1.4 protein.
Length = 586
Score = 79.8 bits (188), Expect = 1e-15
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Frame = +3
Query: 111 NVDRTIDISSQLVKITSKITFENTGKSTIKNFLIAVEDSAKENLAFITAK-DSSNKDLRL 287
NVDRTID +SQ+VK+++ +FEN G LIA+ L+FI+A D S L++
Sbjct: 23 NVDRTIDATSQIVKVSTLYSFENVGNGPQSKVLIALSKEESATLSFISAGIDGSKGKLKI 82
Query: 288 TETTVKGYDYVKFWRVELKDAVNAGSTTAVTVDTVFTKALQPYPTEITQQEDQLVKYIGN 467
+E + + + V+L+ V G+ + ++ T+ L+P P++I Q + Q V +
Sbjct: 83 SEKPAE--KDLAVYEVDLRTPVAKGAKVTIRINLRITQVLEPLPSKIQQSDSQFVVLHTS 140
Query: 468 LYVYSPYYVISQ-XXXXXXXXXXXXXXXXXXPFSQIDGTIHYGPY 599
YV S Y ++Q P Q + YGPY
Sbjct: 141 AYVPSLYETVTQKTTIRTTQGGKLLSATTVSPSKQETERVIYGPY 185
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 223 SSTAIRKFFIVDFPVFSKVIFDVIFTSCEEISIVRSTFLNCISLDIV 83
S+ + F VD VF + D + E+ VRST L+C+ L ++
Sbjct: 246 SNRNVELFHDVDSAVFCLTLSDDFVENESEVVRVRSTILHCLKLQLM 292
>AF025453-10|AAK31402.3| 487|Caenorhabditis elegans Hypothetical
protein C08F1.1 protein.
Length = 487
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 51 VTIYCNSASIDTISSDIQFKNVDRTIDISSQLVKITSKITFENTGKSTIKNFL 209
+ ++CN T + I+ + R + + +++K TSK+ FE G I F+
Sbjct: 184 IFLFCNKELCMTSNWLIETECTFRLVSPNGKIMKQTSKLVFEKPGGQGINRFI 236
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 117 DRTIDISSQLVKITSKITFENTGKSTIKNFLIAVEDSAKENLAFITAKDSSNKDLRLTET 296
+R ID+ ++ + + IT N + I+ L A+E E++ D S K +++ +
Sbjct: 2661 ERAIDLLAEARNLQASITARNKEIAEIETSLRAIEGRMSESI------DYSMKIIKMCYS 2714
Query: 297 TVKGYDYVKFWRVELKDAVNAGST 368
Y + F+R+ LK VN +T
Sbjct: 2715 L---YLFDPFYRISLKSLVNVLNT 2735
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 117 DRTIDISSQLVKITSKITFENTGKSTIKNFLIAVEDSAKENLAFITAKDSSNKDLRLTET 296
+R ID+ ++ + + IT N + I+ L A+E E++ D S K +++ +
Sbjct: 2661 ERAIDLLAEARNLQASITARNKEIAEIETSLRAIEGRMSESI------DYSMKIIKMCYS 2714
Query: 297 TVKGYDYVKFWRVELKDAVNAGST 368
Y + F+R+ LK VN +T
Sbjct: 2715 L---YLFDPFYRISLKSLVNVLNT 2735
>Z68114-7|CAA92161.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.10 protein.
Length = 317
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -2
Query: 202 FFIVDFPVFSKVIFDVIFTSCEEISIVRSTFLNCISLDIVSILALL 65
FF++ FP +++ +IF S + + ++ FL S I S++ L+
Sbjct: 13 FFLIVFPTQLLLLYVIIFHSPKHLKTLKRIFLCNCSCQIFSMITLV 58
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical protein
C27B7.7 protein.
Length = 1471
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 189 STIKNFLIAVEDSAKENLAFITAKDSSNKDLRLTETTVKGYDYVKFWRVELKD---AVNA 359
S I + +I V+D +EN + ++N+ ET V +D + F ++ D A+
Sbjct: 1312 SNITHVIIGVDDGLEENERYQMKMTATNQRHEGPETKVYTFDLISFDENDVIDNFTAIVI 1371
Query: 360 GSTTAVTV-DTVFTK 401
ST V V + ++TK
Sbjct: 1372 NSTVFVEVGNPIYTK 1386
>U50311-7|AAA92311.1| 401|Caenorhabditis elegans Hypothetical
protein C25E10.1 protein.
Length = 401
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 230 CRVFYRDQEILYC*FPCVLKGYFRCNFHKLRRNIYR 123
C F+R +L + C LK +CN +K+RR+ R
Sbjct: 26 CAAFFRRFVVLNLEYEC-LKDEIKCNLNKIRRSSCR 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,905,903
Number of Sequences: 27780
Number of extensions: 231791
Number of successful extensions: 576
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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