Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C19
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 76 2e-14
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 54 7e-08
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 49 4e-06
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 43 2e-04
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 42 6e-04
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 34 0.085
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 33 0.26
SB_27519| Best HMM Match : NIPSNAP (HMM E-Value=5.2e-14) 32 0.45
SB_49936| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_17921| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 30 1.4
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06) 30 1.8
SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 29 4.2
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 29 4.2
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 29 4.2
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 28 7.4
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 27 9.7
SB_31638| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 76.2 bits (179), Expect = 2e-14
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Frame = +1
Query: 85 VNIEDKVFLVTXXXXXXXXXXXRALLSENARHVAFLDIAVREGAALEAELINKFGALRAK 264
+ IE V +VT +ALL + + V LDI + G L + R
Sbjct: 1 MKIEGTVAIVTGGVQGIGLAISKALLDRDGK-VCMLDINEKTGNETLKLLSENYSKHRVL 59
Query: 265 FIKCDVADGDQLAAAYEQVLDKYRRLDGVINNA--AVLSVD---ERSFKKMIDINFTATV 429
FIKCDV Q+ AA+++ D + RLD + NNA AV D ++K +IDIN +
Sbjct: 60 FIKCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVI 119
Query: 430 NSTLKGLDCMGIDKG-GRGGVVVNMSSL 510
TL GLD MG+ G GG +VN++SL
Sbjct: 120 LGTLLGLDHMGVSGAKGHGGTIVNVASL 147
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/78 (32%), Positives = 47/78 (60%)
Frame = +1
Query: 181 VAFLDIAVREGAALEAELINKFGALRAKFIKCDVADGDQLAAAYEQVLDKYRRLDGVINN 360
V +DI + G + L +FG A+FI+CDV + ++L+ A Q + + +LD + NN
Sbjct: 66 VRIIDICINSGLKAQENLEAQFGPGTAEFIECDVCNREKLSEAIRQTVKDHSKLDILCNN 125
Query: 361 AAVLSVDERSFKKMIDIN 414
A + +DE+++ K +++N
Sbjct: 126 AGI--IDEKNWPKSVELN 141
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +1
Query: 181 VAFLDIAVREGAALEAELINKFGALRAKFIKCDVADGDQLAAAYEQVLDKYRRLDGVINN 360
V +D+ + G + L NK G+ FI CDV++ DQL A+ + + + LD V NN
Sbjct: 24 VVLVDLQKKAGNDVTCLLQNKHGSGSVSFISCDVSNQDQLKDAFWETVSTHGHLDIVFNN 83
Query: 361 AAVLSVDERSFKKMIDINFTATV 429
A +L DE + K +D+N ++
Sbjct: 84 AGIL--DEERWSKTLDVNLLNSI 104
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 48.8 bits (111), Expect = 4e-06
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
Frame = +1
Query: 97 DKVFLVTXXXXXXXXXXXRALLSENARHVAFLDIAVREGAA--LEAELINKFGALRAKFI 270
+KV L+T R ++ + L+ ++ AA L +E+ G RA +
Sbjct: 7 EKVMLITGASRGIGAATARLAAAQG--YALCLNYQRQQAAAEALVSEITQAGG--RAIAV 62
Query: 271 KCDVADGDQLAAAYEQVLDKYRRLDGVINNAAVLSVDER-------SFKKMIDINFTATV 429
+ DVAD Q+ + ++ + RLD ++NNA +L R ++++ N +
Sbjct: 63 QADVADERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSF 122
Query: 430 NSTLKGLDCMGIDKGGRGGVVVNMSSLLA-LNPSSHLPVYAATKTAVLQFSIAMGSD 597
+ + M +GG GG +VN+SS A L YAA K A+ ++ + +
Sbjct: 123 LCCREAIKRMSTRQGGNGGAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKE 179
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 42.7 bits (96), Expect = 2e-04
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
Frame = +1
Query: 91 IEDKVFLVTXXXXXXXXXXXRALLSENARHVAFLDIAVREGAALEAELINKFGALRAKFI 270
+E V L+ L+ AR V +D+ EG E FG+ FI
Sbjct: 286 LEKVVALIAGGASGIGRATAIRLIRAGARAV-IVDLPSSEGQNTAQE----FGS-HCTFI 339
Query: 271 KCDVADGDQLAAAYEQVLDKYRRLDGVINNAAV----LSVDERS-------FKKMIDINF 417
V ++ AA + +KY ++ IN AA+ L++ E F++ + IN
Sbjct: 340 PGHVDSESEIKAAIKVAKEKYGCVNASINTAALNTKELTLSESGCPHPLELFEETMKINA 399
Query: 418 TATVNSTLKGLDCMGI---DKGGRGGVVVNMSSLLALNPSSHLPVYAATKTAVLQFSIAM 588
T N + M D+ G GV+VN+SS+ S YAATK A+ ++ M
Sbjct: 400 VGTFNVARLVAESMATNTPDQEGERGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTLPM 459
Query: 589 GSDDYYMKTQVRVLS 633
D + +V +S
Sbjct: 460 ARDLAKLGIRVNTIS 474
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Frame = +1
Query: 184 AFLDIAVREGAALEAELINKFGALRAKFIKCDVADGDQLAAAYEQVLDKYRRLDGVINNA 363
A + + EGA A + G +RA+ ++ D+ + + A A E+++ + R+D ++NNA
Sbjct: 66 ASIQLTDEEGAKDTAREVVSHG-VRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNA 124
Query: 364 AVLSVD---ERSFKKMIDINFTATVNSTL--KGLDCMGIDKGGRGGVVVNMSSLLALNPS 528
++ + +F + I FT V+ + + K G+GG ++N++S+ P
Sbjct: 125 GAMTKAPFLDMAFDEWRKI-FTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPL 183
Query: 529 SHLPVYAATKTAVLQFSIAM 588
Y A K A+ + AM
Sbjct: 184 PDASAYTAAKHALGGLTKAM 203
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +1
Query: 277 DVADGDQLAAAYEQVLDKYRRLDGVINNAAV--LSVDERSFKKMIDINFTATVNSTLKGL 450
DV + + A ++++K R+D ++NNA + V E + I+ F V ++
Sbjct: 95 DVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMT 154
Query: 451 DC-MGIDKGGRGGVVVNMSSLLALNPSSHLPVYAATKTAVLQFSIAM 588
+ + K R G VVN+ S+L + + +Y A+K AV ++ AM
Sbjct: 155 NAVIPHMKKQRAGHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAM 201
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 35.1 bits (77), Expect = 0.049
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Frame = +1
Query: 277 DVADGDQLAAAYEQVLDKYRRLDGVINNA-----AVLSVDERSF-KKMIDINFTATVNST 438
DV + + + + RR+D ++NNA VL S ++M ++NF V T
Sbjct: 257 DVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLT 316
Query: 439 LKGLDCMGIDKGGRGGVVVNMSSLLALNPSSHLPVYAATKTAV 567
+ M KG G ++N+ S+ + +Y ++K AV
Sbjct: 317 KAVIPKM---KGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAV 356
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 34.3 bits (75), Expect = 0.085
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Frame = +1
Query: 277 DVADGDQLAAAYEQVLDKYRRLDGVINNAA----VLSVDERSF---KKMIDINFTATVNS 435
DV + D+ VLD + ++D +INN+ L+V+ K M+D+NF A V+
Sbjct: 109 DVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSL 168
Query: 436 TLKGLDCMGIDKGGRGGVVVNMSSLLALNPSSHLPVYAATKTAV 567
T L M I++ + G +V SS+ + Y ATK AV
Sbjct: 169 TKAVLPHM-IER--KNGHIVVTSSVAGKIGAPMSTSYNATKFAV 209
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/104 (23%), Positives = 45/104 (43%)
Frame = +1
Query: 91 IEDKVFLVTXXXXXXXXXXXRALLSENARHVAFLDIAVREGAALEAELINKFGALRAKFI 270
++ K ++T R L AR V V +G AE++ G + +
Sbjct: 70 LKGKTVIITGANSGIGMEVARDLAWRKAR-VIMACRDVHKGMKAAAEIVQSAGNMDVEVK 128
Query: 271 KCDVADGDQLAAAYEQVLDKYRRLDGVINNAAVLSVDERSFKKM 402
K D+A + ++V ++ R+D +INNA L +++ K+
Sbjct: 129 KLDLASFASIREFAKEVNEEESRVDVLINNAGYLGSQKKTVDKL 172
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 346 GVIN-NAAVLSVDERSFKKMIDINFTATVNSTLKGLDCMGIDKGGRGGVVVNMSSLLALN 522
G +N NA + + F K++D+N + N L M K G+G V+VN SS
Sbjct: 88 GFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRSFLPKM--IKAGKG-VIVNFSSGYGKA 144
Query: 523 PSSHLPVYAATKTAV 567
+ + Y ATK +
Sbjct: 145 GKAKMAPYCATKWGI 159
>SB_27519| Best HMM Match : NIPSNAP (HMM E-Value=5.2e-14)
Length = 312
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +1
Query: 259 AKFIKCDVADGDQLAAAYEQVLDKYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNST 438
A + C V G A + ++ +KY + G+I A + ++ F KMI + T T S
Sbjct: 74 AGYASC-VRKGRLCARSTQEECEKYNEMKGIIFKAKQQNKRKKEFLKMIFLTTTQT-ESQ 131
Query: 439 LKGLDCMGIDKGGRGGV 489
L+ + G+ + RG +
Sbjct: 132 LRAMIAAGLFRPARGAL 148
>SB_49936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 123 CGWSWRRCRKGIALRKCKACRLPRYCSTRRRGFRSRTYK*VWRPK 257
C ++ R CR LR C+ PRYC+ R + RT + RP+
Sbjct: 114 CRYTLRPCR--YTLRPCRYTLRPRYCTLRPCRYTLRTCRYTLRPR 156
>SB_17921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 31.1 bits (67), Expect = 0.79
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Frame = +1
Query: 268 IKCDVADGDQLAAAYEQVLDKYRRLDGVINNAA--VLSVDER----SFKKMIDI--NFTA 423
+ DV D +Q+ AA ++ + K D VINNAA +S ER ++K ++DI N TA
Sbjct: 4 VAADVRDPEQVKAAVDECVAKSGLPDIVINNAAGNFISPSERLSANAWKTIVDIVLNGTA 63
Query: 424 TVN 432
VN
Sbjct: 64 YVN 66
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = +1
Query: 277 DVADGDQLAAAYEQVLDKYRRLDGVINNAAV-----LSVDERSF-KKMIDINFTATVNST 438
DV+ D + A + ++ R+D ++NNA + L +S K+ + NF + +
Sbjct: 64 DVSSDDSVEEALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMS 123
Query: 439 LKGLDCMGIDKGGRGGVVVNMSSLLALNPSSHLPVYAATKTAV 567
+ M K G ++N+SS +Y A+K AV
Sbjct: 124 KAVIPRM---KSDHSGHIINISSTAGHTGMPFTGLYCASKFAV 163
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 256 RAKFIKCDVADGDQLAAAYEQVLDKYRRLDGVINNAAVL 372
R ++ K DV D + V +KY LD ++NNA +L
Sbjct: 73 RVEYHKLDVTSNDSIHELTLHVQEKYGGLDILVNNAGIL 111
>SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06)
Length = 1826
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 7/152 (4%)
Frame = +1
Query: 43 NYILNMASNFGKRSVNIEDKVFLVTXXXXXXXXXXXRALLSENARHVAFLDIAVREGAAL 222
N ILN A G + +++ + L++ A A+ + AA
Sbjct: 1134 NSILNQAKQRG--DMMALNQIISAASSLLNLLEEKDKELINSGRNITADEQAALNKAAAH 1191
Query: 223 EAELINKFGALRAKFIKCDVADGDQLAAAYEQVLDKYRRLDGVINNAAVLS----VDERS 390
+L F + VAD L+++ V +KY + + S +D +
Sbjct: 1192 REQLRTSFSTVLTDIYAYTVADVQMLSSSVAMVTEKYTEITNTAQAKLMTSFSNMLDALT 1251
Query: 391 FKKMIDINFTA---TVNSTLKGLDCMGIDKGG 477
+ D+ F A TVN+ L G+ + + G
Sbjct: 1252 IQSSQDVGFQAVKETVNTMLSGIAGLALGASG 1283
>SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1626
Score = 29.1 bits (62), Expect = 3.2
Identities = 37/132 (28%), Positives = 58/132 (43%)
Frame = -2
Query: 467 SIPMQSRPFKVLFTVAVKFISIIFLKERSSTLKTAALFMTPSSLRYLSKTCSYAAASWSP 288
S P+Q+ P + TVAV S LK KTA++ +P YL +T S A + +
Sbjct: 178 SSPVQNVPNNLATTVAVTATS---LKRTFDFAKTASVSASPVPSSYL-QTVSKALVTSTE 233
Query: 287 SATSHFINFALRAPNLFISSASKAAPSRTAISRKATCLAFSESNALXXXXXXXXXXPVTK 108
++TS R +L +S+S A+ + TA S TC S + TK
Sbjct: 234 NSTSK------RTKSLSSASSSAASLATTAFS---TC--SSSGSTFIAAHQLKSGNSGTK 282
Query: 107 NTLSSIFTDRLP 72
T++ + + P
Sbjct: 283 KTINMLNPGKAP 294
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +1
Query: 349 VINNAAVLS------VDERSFKKMIDINFTATVNSTLKGLDCMGIDKGGRGGVVVNMSSL 510
++NNA + S + + +++ D+N +N T L + G +VN++S
Sbjct: 628 IVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLLKKSCGR----IVNVASC 683
Query: 511 LALNPSSHLPVYAATKTAVLQFSIAM 588
P L Y+A+K AV FS A+
Sbjct: 684 AGKLPGPGLSAYSASKYAVQSFSDAL 709
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 280 VADGDQLAAAYEQVLDKYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNSTLKG 447
V GDQ+ E + + R+D V+NNA +L ++S +M ++++ LKG
Sbjct: 77 VEQGDQVV---ETAIKAFGRIDVVVNNAGILR--DKSILRMSELDWDLVQRVHLKG 127
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -2
Query: 296 WSPSATSHFINFALRAPNLFISSASKAAPSRTAISRKATCLAFSESNALXXXXXXXXXXP 117
W+ +A SH I L+ F+S + S T SR+ TC+ F+ +N
Sbjct: 868 WNMAAKSHNI---LQESYHFVSLRDEPKRSITPESRQVTCICFN-ANGKLLAGAMENKLN 923
Query: 116 VTKNTLSSIFTDRL 75
+ + S+F DRL
Sbjct: 924 IWSSAGKSLFCDRL 937
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 391 FKKMIDINFTATVNSTLKGLDCMGIDK---GGRGGVVVNMSSLLALNPSSHLPVYAATKT 561
F+K++ +N T + N + M ++ GG GV+ N +S+ A + Y+A+K
Sbjct: 120 FEKVLKVNTTGSFNVIRLVAEQMIKNEPTEGGERGVITNTASVAAFDGQMGQAAYSASKG 179
Query: 562 AVLQFSIAMGSD 597
++ ++ + D
Sbjct: 180 GIVGMTLPIARD 191
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 350 TPSSLRYLSKTCSYAAASWSPSATSHFINFALRAPNLFISSASKAAPSRTAISRKAT 180
+P+S Y S + SY+ AS S S TS + A+ + + S S A+PS T S T
Sbjct: 697 SPASPSYTSASPSYSPASPSYSPTSPSYSPAIPSNSPASPSYSPASPSYTPASPSYT 753
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 27.5 bits (58), Expect = 9.7
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +1
Query: 277 DVADGDQLAAAYEQVLDKYRRLDGVINNA------AVLSVDERSFKKMIDINFTATVNST 438
DVAD +++ +++++ D ++NNA + L + SF +M + N A +
Sbjct: 10 DVADIEKM----QKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIA 65
Query: 439 LKGLDCMGIDKGGRGGVVVNMSSL---LALNPSSHLPVYAATKTAVLQFSIAMGS-DDYY 606
M + KG GG +VN+SS+ L L S L Y+ + + F + G+ + Y
Sbjct: 66 QAVAKKM-VAKG-EGGAIVNVSSVFTELHLPNSISLGKYSNAALSPVYFRRSDGNLNRYK 123
Query: 607 MKTQVRVLSV 636
K +R+ +
Sbjct: 124 TKESIRIQDI 133
>SB_31638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1526
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 266 NFALRAPNLFISSASKAAPSRTAISRKA 183
NFA+ AP+ +S KA P + ++SR A
Sbjct: 287 NFAIDAPSTTATSKPKATPGKPSLSRGA 314
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,555,905
Number of Sequences: 59808
Number of extensions: 324126
Number of successful extensions: 674
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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