Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C19
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    45   5e-07
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.82 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.5  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   7.6  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.6  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 45.2 bits (102), Expect = 5e-07
 Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
 Frame = +1

Query: 97  DKVFLVTXXXXXXXXXXXRALLSENARHVAFLDIAVREGAALEAELINKFGALRAKFIKC 276
           D+V LVT             L+ +  + +      V +   L  EL +K G L    ++C
Sbjct: 7   DEVALVTGANSGIGKCLIECLVGKGMKVIGIAP-QVDKMKTLVEELKSKPGKLVP--LQC 63

Query: 277 DVADGDQLAAAYEQVLDKYRRLDGVINNAAV-----LSVDE-RSFKKMIDINFTATVNST 438
           D+++ + +    E V      +D +INNA +     L  DE   +KK+ DIN        
Sbjct: 64  DLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMI 123

Query: 439 LKGLDCMGIDKGGRGGVVVNMSSLLALN---PSSHLPVYAATKTAVLQFSIAMGSDDYYM 609
            + L  M   KG   G++VN++    LN    + + P Y A+K A+   +  + S+    
Sbjct: 124 QEVLKLMK-KKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQC 182

Query: 610 KTQVRVLSV 636
           ++ ++V+S+
Sbjct: 183 ESNIKVISI 191


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 502 SSLLALNPSSHLPVYAATKTAVLQFSIAMGSD 597
           +SL       HLP+ A+    +  F I  GSD
Sbjct: 190 ASLAMTREEKHLPIGASVLFEIFPFCIVFGSD 221


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 490 VVNMSSLL-ALNPSSHLPVYAATKTAVLQFSIAMGSDDYYMKTQVRVLSV 636
           VVN + +    N +S   +      A+ + +   GSDDY    +VRV+ V
Sbjct: 115 VVNWNKIPEGANTTSTTKIIDGHVVAINETTYTDGSDDYSTLIRVRVIDV 164


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 589 GSDDYYMKTQVRVLSV 636
           GSDDY    +VRV+ V
Sbjct: 101 GSDDYSTLIRVRVIDV 116


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 589 GSDDYYMKTQVRVLSV 636
           GSDDY    +VRV+ V
Sbjct: 149 GSDDYSTLIRVRVIDV 164


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 589 GSDDYYMKTQVRVLSV 636
           GSDDY    +VRV+ V
Sbjct: 149 GSDDYSTLIRVRVIDV 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,959
Number of Sequences: 438
Number of extensions: 3117
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)