Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C17
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 82 4e-16
01_06_0824 - 32243495-32244319,32244449-32244859 79 2e-15
01_01_1152 + 9170628-9171899 73 2e-13
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 71 5e-13
11_01_0750 - 6315126-6315896,6316371-6316784 69 2e-12
04_04_0619 + 26652923-26653267,26653440-26654273 69 4e-12
11_02_0011 - 7337618-7338496,7338596-7338991 67 1e-11
11_02_0012 - 7346282-7347136,7347234-7347593 66 2e-11
11_02_0014 - 7352619-7352918,7353173-7353418 63 1e-10
11_01_0767 + 6438648-6438809,6439146-6440000 60 1e-09
11_01_0771 + 6453130-6454488 57 1e-08
05_06_0044 - 25150322-25151260 47 1e-05
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.010
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 29 2.7
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 29 2.7
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 29 3.6
04_03_0260 - 13580396-13582990 28 4.7
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 28 4.7
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 28 4.7
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 6.2
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 27 8.2
03_05_0350 + 23368111-23368219,23368519-23368526,23368650-233686... 27 8.2
02_01_0074 + 519401-519512,519513-519548,519647-519706,519785-51... 27 8.2
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 81.8 bits (193), Expect = 4e-16
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Frame = +1
Query: 238 GKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQD 417
GK E A+ +N+WVE T+ IK ++ P S+D +T+ VL NA+YFKG+W +KFD T+D
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Query: 418 RPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPYV--GE--ESSLLVVLPNKID 582
FH+ K++Q P M Y S + + K+++LPY G+ + S+ ++LP D
Sbjct: 268 GEFHLLDGKSVQAPFM-STSKKQYILSYD-NLKVLKLPYQQGGDKRQFSMYILLPEAQD 324
Score = 77.8 bits (183), Expect = 6e-15
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 250 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFH 429
E +N+WV+ T+ IKN+ P S++ +T+ VL NA+YFKG+W +KFD T+D FH
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFH 523
Query: 430 VNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPYV--GE--ESSLLVVLPNKID 582
+ +++Q P M R Y S + K+++LPY+ G+ + S+ ++LP D
Sbjct: 524 LLDGESVQAPFMSTRKK-QYLSSYD-SLKVLKLPYLQGGDKRQFSMYILLPEAQD 576
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 79.4 bits (187), Expect = 2e-15
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +1
Query: 121 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 297
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E T
Sbjct: 96 GPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAG 155
Query: 298 RIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRG 477
RIK+ + ++D +T VL NA+YFKG W+ KFD T D F++ + P M G
Sbjct: 156 RIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSG 214
Query: 478 DFAYGESSELDAKLIELPY 534
+ Y + K++ LPY
Sbjct: 215 KWQY-IACRAGYKVLRLPY 232
>01_01_1152 + 9170628-9171899
Length = 423
Score = 72.5 bits (170), Expect = 2e-13
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Frame = +1
Query: 1 LAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELN 177
+A + GE+ ELL + P+ + ++ T L ++R + A V++ G L
Sbjct: 75 VADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTSF--ACGVWVDRGRALT 132
Query: 178 DQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVL 354
+FA + + + + +F E+A +N +V D T I++++ P+S+DSST VL
Sbjct: 133 PEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVL 192
Query: 355 VNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPY 534
NA++FKG+W F T PFH+ ++ P M F ++ ++LPY
Sbjct: 193 ANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPY 252
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 71.3 bits (167), Expect = 5e-13
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Frame = +1
Query: 250 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFH 429
E A+ +N+WV+ T+ IK ++ P S+D +T+ VL NA+YFKG+W +KFD T+D F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 430 VNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPYVG----EESSLLVVLPNKID 582
+ K++ P M Y S + K+++LPY + S+ ++LP D
Sbjct: 64 LLDGKSVLAPFM-STSKKQYLSSYD-SLKVLKLPYQKGRDLRQFSMYILLPEAQD 116
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 121 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 297
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV+D T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 298 RIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTM-YKR 474
+ L+ ++D +T VL +A+YF+G W D+ D T ++ F+ +++VP + Y R
Sbjct: 157 TVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDR 216
Query: 475 GD-FAYGESSELDAKLIELPY 534
FA + + K+I+LPY
Sbjct: 217 TRLFAVHD----NFKVIKLPY 233
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 68.5 bits (160), Expect = 4e-12
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Frame = +1
Query: 1 LAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELND 180
LA + GE+ +LL + + + A L ++R+ L A +++ L
Sbjct: 36 LATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFAAGIFVDRSLRLRP 93
Query: 181 QFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRIKNLVDPSSLDSSTQCVLV 357
+F + + ++++F AA +N ++ TN R+ N + P + SST+CVL
Sbjct: 94 EFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKCVLA 153
Query: 358 NAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPY 534
NA++FK +W KF+ TQ R FH + VP + L K+++L Y
Sbjct: 154 NAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFDGLGFKVLQLFY 212
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 66.9 bits (156), Expect = 1e-11
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Frame = +1
Query: 1 LAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLANKVYIANG 165
+A + G + DELL ++D ++V +AV L + S G + A V+
Sbjct: 47 VAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS-GGPRVSDACGVWHDET 105
Query: 166 NELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIKNLVDPSSLDSST 342
EL + + + + + NF + + + IN WV TNK I ++ S+ T
Sbjct: 106 LELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDT 165
Query: 343 QCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLI 522
VLVNAIYFKG W + F + T FH ++ VP M R D G ++
Sbjct: 166 ALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHDGF--TVL 223
Query: 523 ELPY 534
+LPY
Sbjct: 224 KLPY 227
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/90 (38%), Positives = 46/90 (51%)
Frame = +1
Query: 265 INTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDK 444
IN WV TNK I+ ++ S+ T VLVNAIYFKG W + F +E T FH
Sbjct: 128 INKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGS 187
Query: 445 TIQVPTMYKRGDFAYGESSELDAKLIELPY 534
++ P M R D G K+++LPY
Sbjct: 188 SVDAPFMSSREDQYIGFYDGF--KVLKLPY 215
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/92 (39%), Positives = 46/92 (50%)
Frame = +1
Query: 265 INTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDK 444
IN WV TNK I ++ S+ T VLVNAIYFKG W D F +E T FH
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGS 149
Query: 445 TIQVPTMYKRGDFAYGESSELDAKLIELPYVG 540
++ V M R D G + +++LPY G
Sbjct: 150 SVNVRFMRSREDQYIGFYDGFN--VLKLPYNG 179
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%)
Frame = +1
Query: 250 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFH 429
EA IN WV T I ++ P S T+ V+ NAIYFKG W FDK T +R F
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFR 116
Query: 430 VNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPY 534
+++VP M + + + +++ LPY
Sbjct: 117 RLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPY 151
>11_01_0771 + 6453130-6454488
Length = 452
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +1
Query: 241 KNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDR 420
K EEA IN W T K I +++ P S+ T VL NAIYFKG W F++ T+ +
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
Query: 421 PFH 429
PF+
Sbjct: 229 PFY 231
>05_06_0044 - 25150322-25151260
Length = 312
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 148 VYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSS 327
V++ LN FA + VF + V++ G A IN W T +K+++ S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSA--GNPAAARAEINEWFSSQTGGFVKDILSNSI 60
Query: 328 LDS-----------STQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTM 465
D S L N++YF W F LT++ FHV+ D ++VP M
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +1
Query: 22 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 195
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 196 S--RDVFNSEVQNLNFGKNEEAANI 264
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>06_03_0551 -
22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/65 (20%), Positives = 34/65 (52%)
Frame = +1
Query: 229 LNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKEL 408
L G++ E + N ++D ++ ++V + + + LV+ +Y++ + +FD++
Sbjct: 100 LIIGRDSEVDKLFNL-IKDRSHTNTPHVVSVWGIPGTGRTALVSNVYYRCYYDTQFDRQT 158
Query: 409 TQDRP 423
T + P
Sbjct: 159 TVNMP 163
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 355 VNAIYFKGSWKDKFDK--ELTQDRPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLIEL 528
V + + WKD+ DK E QD+ + P R F G + + +L
Sbjct: 788 VEKVRLQKIWKDRRDKLREAAQDKARPLGDQSATDGPDANNRRAFNKGNKRKSHDRSSKL 847
Query: 529 PYVGE 543
PY GE
Sbjct: 848 PYAGE 852
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 262 IINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD 441
I + + D T + +++ P + + Q KG +K+ F K+ T D P H +KD
Sbjct: 301 IASKGLRDDTTCIVIDIIPPEKISPTVQPAKKAG---KGLFKNIFYKKATSDSPCHADKD 357
Query: 442 KTIQ 453
+ Q
Sbjct: 358 QCTQ 361
>04_03_0260 - 13580396-13582990
Length = 864
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 184 FAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 333
F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 737 FGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNNQLIDMIDKHSSD 785
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 181 QFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 333
+F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 531 KFGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSND 580
>01_07_0197 +
41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 232 NFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSST 342
N K + + + TWV+ ++ + L+D ++LDSST
Sbjct: 490 NKRKRDATSELSETWVQCDACRKWRRLLDGTALDSST 526
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 269 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 138
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 338 LLSNELGSTKFLIRLLVWSSTQVLIMLAASSFLPK 234
L +NELG +FL+ +++W + L + S K
Sbjct: 356 LANNELGEYEFLVAIVIWYEVLYAVNLVSKSLQGK 390
>03_05_0350 +
23368111-23368219,23368519-23368526,23368650-23368658,
23368768-23368839,23368978-23369097,23369638-23370058,
23370131-23370285,23370461-23370625,23370822-23370825,
23371739-23371799,23371933-23372035,23372422-23372854,
23372978-23373120,23373608-23373740,23375567-23375576,
23375852-23375975,23376595-23377012,23377153-23377343,
23377569-23377811
Length = 973
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 310 LVDPSSLDSSTQCVLVNAIYFKG-SWKDKFD 399
+ DPS + ST C + NAI G WK+ D
Sbjct: 483 IFDPSGCEKSTSCSMENAIDHVGQGWKEHND 513
>02_01_0074 +
519401-519512,519513-519548,519647-519706,519785-519877,
519968-520033,520146-520223,520300-520407,520478-520554,
520632-520706,520792-520799,520981-521098,521199-521625,
521627-521661
Length = 430
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +1
Query: 61 NDNVTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFG 240
N ++ + +LNQK +SI Y+A + +N A N EV F
Sbjct: 324 NASIDRKYIPELNQKFKSIDEAQNYFNFYAYMAGFSIVNAHSARTLSKKRNGEVIRETFK 383
Query: 241 KNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLV 357
N+ + N E T++R N V + + +CVLV
Sbjct: 384 YNKYVKSDCNKKEETITSERKTNEV----IGTECKCVLV 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.132 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,713,177
Number of Sequences: 37544
Number of extensions: 265022
Number of successful extensions: 484
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -